Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.83■□□□□ 0.77
THBS3P49746 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.83■□□□□ 0.76
THBS3P49746 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.83■□□□□ 0.76
THBS3P49746 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
THBS3P49746 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
THBS3P49746 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
THBS3P49746 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
THBS3P49746 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
THBS3P49746 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
THBS3P49746 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
THBS3P49746 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
THBS3P49746 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
THBS3P49746 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
THBS3P49746 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
THBS3P49746 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
THBS3P49746 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
THBS3P49746 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
THBS3P49746 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
THBS3P49746 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
THBS3P49746 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
THBS3P49746 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
THBS3P49746 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
THBS3P49746 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
THBS3P49746 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
THBS3P49746 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
THBS3P49746 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
THBS3P49746 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.81■□□□□ 0.76
THBS3P49746 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
THBS3P49746 AC126177.7-201ENST00000547904 679 ntBASIC19.81■□□□□ 0.76
THBS3P49746 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
THBS3P49746 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
THBS3P49746 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
THBS3P49746 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
THBS3P49746 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
THBS3P49746 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.8■□□□□ 0.76
THBS3P49746 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
THBS3P49746 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.8■□□□□ 0.76
THBS3P49746 AC010501.1-201ENST00000606270 1962 ntBASIC19.79■□□□□ 0.76
THBS3P49746 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.79■□□□□ 0.76
THBS3P49746 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.79■□□□□ 0.76
THBS3P49746 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
THBS3P49746 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
THBS3P49746 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
THBS3P49746 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.78■□□□□ 0.76
THBS3P49746 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
THBS3P49746 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
THBS3P49746 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.78■□□□□ 0.76
THBS3P49746 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
THBS3P49746 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
THBS3P49746 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
THBS3P49746 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
THBS3P49746 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
THBS3P49746 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.77■□□□□ 0.76
THBS3P49746 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
THBS3P49746 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
THBS3P49746 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.77■□□□□ 0.75
THBS3P49746 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
THBS3P49746 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
THBS3P49746 AC020928.2-201ENST00000588717 2197 ntBASIC19.76■□□□□ 0.75
THBS3P49746 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
THBS3P49746 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
THBS3P49746 AL359504.2-201ENST00000605506 1601 ntBASIC19.76■□□□□ 0.75
THBS3P49746 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
THBS3P49746 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
THBS3P49746 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.75■□□□□ 0.75
THBS3P49746 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
THBS3P49746 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
THBS3P49746 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.74■□□□□ 0.75
THBS3P49746 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.74■□□□□ 0.75
THBS3P49746 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
THBS3P49746 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.74■□□□□ 0.75
THBS3P49746 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
THBS3P49746 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
THBS3P49746 ERN1-208ENST00000606895 2068 ntBASIC19.74■□□□□ 0.75
THBS3P49746 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
THBS3P49746 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
THBS3P49746 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
THBS3P49746 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.73■□□□□ 0.75
THBS3P49746 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
THBS3P49746 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
THBS3P49746 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.73■□□□□ 0.75
THBS3P49746 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
THBS3P49746 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.73■□□□□ 0.75
THBS3P49746 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
THBS3P49746 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
THBS3P49746 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
THBS3P49746 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
THBS3P49746 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
THBS3P49746 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
THBS3P49746 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
THBS3P49746 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
THBS3P49746 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
THBS3P49746 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
THBS3P49746 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
THBS3P49746 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.71■□□□□ 0.75
THBS3P49746 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
THBS3P49746 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
THBS3P49746 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
THBS3P49746 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
THBS3P49746 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms