Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRAP04437 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRAP04437 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRAP04437 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRAP04437 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.32■□□□□ 0.52
TCRAP04437 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRAP04437 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRAP04437 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRAP04437 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TCRAP04437 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.32■□□□□ 0.52
TCRAP04437 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TCRAP04437 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TCRAP04437 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.31■□□□□ 0.52
TCRAP04437 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.31■□□□□ 0.52
TCRAP04437 AP006261.1-201ENST00000584783 668 ntBASIC18.31■□□□□ 0.52
TCRAP04437 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TCRAP04437 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
TCRAP04437 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TCRAP04437 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TCRAP04437 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TCRAP04437 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.3■□□□□ 0.52
TCRAP04437 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.3■□□□□ 0.52
TCRAP04437 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TCRAP04437 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCRAP04437 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TCRAP04437 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC18.3■□□□□ 0.52
TCRAP04437 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.3■□□□□ 0.52
TCRAP04437 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCRAP04437 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TCRAP04437 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TCRAP04437 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCRAP04437 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
TCRAP04437 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCRAP04437 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.3■□□□□ 0.52
TCRAP04437 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TCRAP04437 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.29■□□□□ 0.52
TCRAP04437 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TCRAP04437 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.29■□□□□ 0.52
TCRAP04437 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TCRAP04437 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRAP04437 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRAP04437 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRAP04437 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRAP04437 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRAP04437 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRAP04437 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TCRAP04437 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
TCRAP04437 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.27■□□□□ 0.52
TCRAP04437 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TCRAP04437 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TCRAP04437 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.27■□□□□ 0.52
TCRAP04437 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.27■□□□□ 0.52
TCRAP04437 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.27■□□□□ 0.52
TCRAP04437 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TCRAP04437 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TCRAP04437 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TCRAP04437 AC087741.3-201ENST00000624270 1347 ntBASIC18.26■□□□□ 0.51
TCRAP04437 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRAP04437 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.26■□□□□ 0.51
TCRAP04437 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRAP04437 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRAP04437 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TCRAP04437 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRAP04437 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRAP04437 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRAP04437 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRAP04437 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.25■□□□□ 0.51
TCRAP04437 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TCRAP04437 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TCRAP04437 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRAP04437 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.25■□□□□ 0.51
TCRAP04437 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRAP04437 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TCRAP04437 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.24■□□□□ 0.51
TCRAP04437 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TCRAP04437 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRAP04437 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TCRAP04437 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.24■□□□□ 0.51
TCRAP04437 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TCRAP04437 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.24■□□□□ 0.51
TCRAP04437 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRAP04437 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TCRAP04437 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TCRAP04437 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.23■□□□□ 0.51
TCRAP04437 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRAP04437 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRAP04437 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TCRAP04437 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.23■□□□□ 0.51
TCRAP04437 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC18.23■□□□□ 0.51
TCRAP04437 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRAP04437 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.23■□□□□ 0.51
TCRAP04437 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TCRAP04437 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRAP04437 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRAP04437 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRAP04437 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRAP04437 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRAP04437 AC044849.2-201ENST00000606596 710 ntBASIC18.22■□□□□ 0.51
TCRAP04437 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRAP04437 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms