Protein–RNA interactions for Protein: P00403

MT-CO2, Cytochrome c oxidase subunit 2, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO2P00403 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MT-CO2P00403 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.31■□□□□ 0.68
MT-CO2P00403 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
MT-CO2P00403 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MT-CO2P00403 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
MT-CO2P00403 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
MT-CO2P00403 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MT-CO2P00403 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
MT-CO2P00403 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MT-CO2P00403 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
MT-CO2P00403 ZNRF2P2-203ENST00000454624 420 ntBASIC19.3■□□□□ 0.68
MT-CO2P00403 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.3■□□□□ 0.68
MT-CO2P00403 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.3■□□□□ 0.68
MT-CO2P00403 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
MT-CO2P00403 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.29■□□□□ 0.68
MT-CO2P00403 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.29■□□□□ 0.68
MT-CO2P00403 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MT-CO2P00403 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-CO2P00403 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.29■□□□□ 0.68
MT-CO2P00403 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MT-CO2P00403 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.29■□□□□ 0.68
MT-CO2P00403 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-CO2P00403 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MT-CO2P00403 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-CO2P00403 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-CO2P00403 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MT-CO2P00403 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MT-CO2P00403 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MT-CO2P00403 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MT-CO2P00403 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MT-CO2P00403 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.28■□□□□ 0.68
MT-CO2P00403 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MT-CO2P00403 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.28■□□□□ 0.68
MT-CO2P00403 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.28■□□□□ 0.68
MT-CO2P00403 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MT-CO2P00403 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MT-CO2P00403 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
MT-CO2P00403 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.27■□□□□ 0.68
MT-CO2P00403 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.27■□□□□ 0.68
MT-CO2P00403 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.27■□□□□ 0.68
MT-CO2P00403 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
MT-CO2P00403 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MT-CO2P00403 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MT-CO2P00403 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MT-CO2P00403 MIR219A2-201ENST00000608502 1504 ntBASIC19.26■□□□□ 0.67
MT-CO2P00403 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MT-CO2P00403 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.26■□□□□ 0.67
MT-CO2P00403 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
MT-CO2P00403 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
MT-CO2P00403 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MT-CO2P00403 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MT-CO2P00403 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.26■□□□□ 0.67
MT-CO2P00403 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MT-CO2P00403 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
MT-CO2P00403 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MT-CO2P00403 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MT-CO2P00403 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MT-CO2P00403 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-CO2P00403 AC148477.6-201ENST00000623746 465 ntBASIC19.25■□□□□ 0.67
MT-CO2P00403 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MT-CO2P00403 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
MT-CO2P00403 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-CO2P00403 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
MT-CO2P00403 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MT-CO2P00403 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MT-CO2P00403 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-CO2P00403 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.24■□□□□ 0.67
MT-CO2P00403 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-CO2P00403 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.24■□□□□ 0.67
MT-CO2P00403 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-CO2P00403 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-CO2P00403 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-CO2P00403 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-CO2P00403 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MT-CO2P00403 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-CO2P00403 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.23■□□□□ 0.67
MT-CO2P00403 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-CO2P00403 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-CO2P00403 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-CO2P00403 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-CO2P00403 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MT-CO2P00403 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
MT-CO2P00403 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
MT-CO2P00403 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MT-CO2P00403 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.22■□□□□ 0.67
MT-CO2P00403 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-CO2P00403 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MT-CO2P00403 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-CO2P00403 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.22■□□□□ 0.67
MT-CO2P00403 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.22■□□□□ 0.67
MT-CO2P00403 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.22■□□□□ 0.67
MT-CO2P00403 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.22■□□□□ 0.67
MT-CO2P00403 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-CO2P00403 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
MT-CO2P00403 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MT-CO2P00403 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-CO2P00403 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-CO2P00403 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-CO2P00403 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.21■□□□□ 0.67
MT-CO2P00403 HLA-V-202ENST00000446817 847 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 189.5 ms