Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
LTN1O94822 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC32.75■■■□□ 2.83
LTN1O94822 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
LTN1O94822 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC32.75■■■□□ 2.83
LTN1O94822 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
LTN1O94822 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC32.74■■■□□ 2.83
LTN1O94822 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
LTN1O94822 THA1P-201ENST00000590384 1145 ntBASIC32.74■■■□□ 2.83
LTN1O94822 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC32.74■■■□□ 2.83
LTN1O94822 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
LTN1O94822 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
LTN1O94822 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
LTN1O94822 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
LTN1O94822 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
LTN1O94822 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC32.72■■■□□ 2.83
LTN1O94822 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC32.72■■■□□ 2.83
LTN1O94822 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC32.72■■■□□ 2.83
LTN1O94822 AC019069.1-201ENST00000610008 1333 ntBASIC32.71■■■□□ 2.83
LTN1O94822 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
LTN1O94822 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC32.71■■■□□ 2.83
LTN1O94822 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
LTN1O94822 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
LTN1O94822 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
LTN1O94822 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
LTN1O94822 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
LTN1O94822 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC32.7■■■□□ 2.82
LTN1O94822 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
LTN1O94822 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
LTN1O94822 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
LTN1O94822 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC32.69■■■□□ 2.82
LTN1O94822 Z92544.1-202ENST00000571933 1220 ntBASIC32.69■■■□□ 2.82
LTN1O94822 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC32.69■■■□□ 2.82
LTN1O94822 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC32.68■■■□□ 2.82
LTN1O94822 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC32.68■■■□□ 2.82
LTN1O94822 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC32.68■■■□□ 2.82
LTN1O94822 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC32.68■■■□□ 2.82
LTN1O94822 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC32.68■■■□□ 2.82
LTN1O94822 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC32.68■■■□□ 2.82
LTN1O94822 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
LTN1O94822 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC32.67■■■□□ 2.82
LTN1O94822 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC32.67■■■□□ 2.82
LTN1O94822 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC32.66■■■□□ 2.82
LTN1O94822 MTURN-203ENST00000409688 843 ntTSL 2 BASIC32.66■■■□□ 2.82
LTN1O94822 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC32.66■■■□□ 2.82
LTN1O94822 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC32.66■■■□□ 2.82
LTN1O94822 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
LTN1O94822 AL356441.2-201ENST00000443009 864 ntBASIC32.65■■■□□ 2.82
LTN1O94822 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC32.65■■■□□ 2.82
LTN1O94822 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
LTN1O94822 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
LTN1O94822 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC32.65■■■□□ 2.82
LTN1O94822 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
LTN1O94822 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC32.65■■■□□ 2.82
LTN1O94822 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC32.64■■■□□ 2.81
LTN1O94822 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC32.63■■■□□ 2.81
LTN1O94822 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC32.63■■■□□ 2.81
LTN1O94822 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
LTN1O94822 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC32.63■■■□□ 2.81
LTN1O94822 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
LTN1O94822 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC32.63■■■□□ 2.81
LTN1O94822 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC32.63■■■□□ 2.81
LTN1O94822 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC32.63■■■□□ 2.81
LTN1O94822 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC32.62■■■□□ 2.81
LTN1O94822 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
LTN1O94822 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC32.62■■■□□ 2.81
LTN1O94822 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC32.61■■■□□ 2.81
LTN1O94822 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
LTN1O94822 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC32.6■■■□□ 2.81
LTN1O94822 LONRF2P2-201ENST00000439212 571 ntBASIC32.6■■■□□ 2.81
LTN1O94822 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
LTN1O94822 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC32.59■■■□□ 2.81
LTN1O94822 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC32.59■■■□□ 2.81
LTN1O94822 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC32.59■■■□□ 2.81
LTN1O94822 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC32.59■■■□□ 2.81
LTN1O94822 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
LTN1O94822 AC142472.1-201ENST00000612013 1741 ntBASIC32.58■■■□□ 2.81
LTN1O94822 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC32.58■■■□□ 2.81
LTN1O94822 AC239859.2-201ENST00000444165 318 ntBASIC32.58■■■□□ 2.81
LTN1O94822 CREM-229ENST00000474362 1030 ntTSL 2 BASIC32.58■■■□□ 2.81
LTN1O94822 GRAMD4P7-201ENST00000578182 1232 ntBASIC32.58■■■□□ 2.81
LTN1O94822 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
LTN1O94822 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
LTN1O94822 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC32.58■■■□□ 2.81
LTN1O94822 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC32.58■■■□□ 2.81
LTN1O94822 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
LTN1O94822 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC32.57■■■□□ 2.8
LTN1O94822 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
LTN1O94822 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC32.57■■■□□ 2.8
LTN1O94822 AC022616.5-201ENST00000518796 181 ntBASIC32.57■■■□□ 2.8
LTN1O94822 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC32.57■■■□□ 2.8
LTN1O94822 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC32.56■■■□□ 2.8
LTN1O94822 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC32.56■■■□□ 2.8
LTN1O94822 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC32.56■■■□□ 2.8
LTN1O94822 AC139426.1-201ENST00000568218 2529 ntBASIC32.55■■■□□ 2.8
LTN1O94822 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
LTN1O94822 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC32.55■■■□□ 2.8
LTN1O94822 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
LTN1O94822 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
LTN1O94822 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
LTN1O94822 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms