Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
NPIPB4C9JG80 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.54■■□□□ 1.04
NPIPB4C9JG80 SMPD5-203ENST00000639008 1464 ntBASIC21.54■■□□□ 1.04
NPIPB4C9JG80 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.54■■□□□ 1.04
NPIPB4C9JG80 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.54■■□□□ 1.04
NPIPB4C9JG80 AC096887.2-201ENST00000623443 1957 ntBASIC21.54■■□□□ 1.04
NPIPB4C9JG80 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NPIPB4C9JG80 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NPIPB4C9JG80 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
NPIPB4C9JG80 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.53■■□□□ 1.04
NPIPB4C9JG80 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
NPIPB4C9JG80 AC022413.1-201ENST00000624602 984 ntBASIC21.53■■□□□ 1.04
NPIPB4C9JG80 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.53■■□□□ 1.04
NPIPB4C9JG80 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NPIPB4C9JG80 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NPIPB4C9JG80 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NPIPB4C9JG80 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NPIPB4C9JG80 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NPIPB4C9JG80 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NPIPB4C9JG80 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.52■■□□□ 1.04
NPIPB4C9JG80 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NPIPB4C9JG80 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NPIPB4C9JG80 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NPIPB4C9JG80 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
NPIPB4C9JG80 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.51■■□□□ 1.03
NPIPB4C9JG80 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.51■■□□□ 1.03
NPIPB4C9JG80 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NPIPB4C9JG80 AC020928.2-201ENST00000588717 2197 ntBASIC21.51■■□□□ 1.03
NPIPB4C9JG80 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NPIPB4C9JG80 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.51■■□□□ 1.03
NPIPB4C9JG80 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
NPIPB4C9JG80 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
NPIPB4C9JG80 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
NPIPB4C9JG80 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NPIPB4C9JG80 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NPIPB4C9JG80 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
NPIPB4C9JG80 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.5■■□□□ 1.03
NPIPB4C9JG80 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NPIPB4C9JG80 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
NPIPB4C9JG80 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NPIPB4C9JG80 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NPIPB4C9JG80 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NPIPB4C9JG80 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
NPIPB4C9JG80 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NPIPB4C9JG80 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.48■■□□□ 1.03
NPIPB4C9JG80 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NPIPB4C9JG80 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
NPIPB4C9JG80 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NPIPB4C9JG80 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
NPIPB4C9JG80 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.47■■□□□ 1.03
NPIPB4C9JG80 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
NPIPB4C9JG80 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
NPIPB4C9JG80 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NPIPB4C9JG80 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NPIPB4C9JG80 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NPIPB4C9JG80 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NPIPB4C9JG80 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NPIPB4C9JG80 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NPIPB4C9JG80 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.46■■□□□ 1.03
NPIPB4C9JG80 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.46■■□□□ 1.03
NPIPB4C9JG80 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.45■■□□□ 1.02
NPIPB4C9JG80 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
NPIPB4C9JG80 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NPIPB4C9JG80 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NPIPB4C9JG80 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.45■■□□□ 1.02
NPIPB4C9JG80 RP9P-202ENST00000450133 1212 ntBASIC21.45■■□□□ 1.02
NPIPB4C9JG80 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.45■■□□□ 1.02
NPIPB4C9JG80 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NPIPB4C9JG80 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NPIPB4C9JG80 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.45■■□□□ 1.02
NPIPB4C9JG80 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
NPIPB4C9JG80 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NPIPB4C9JG80 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
NPIPB4C9JG80 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NPIPB4C9JG80 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.44■■□□□ 1.02
NPIPB4C9JG80 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
NPIPB4C9JG80 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.44■■□□□ 1.02
NPIPB4C9JG80 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NPIPB4C9JG80 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.44■■□□□ 1.02
NPIPB4C9JG80 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NPIPB4C9JG80 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NPIPB4C9JG80 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.43■■□□□ 1.02
NPIPB4C9JG80 AC007029.1-201ENST00000604183 313 ntBASIC21.43■■□□□ 1.02
NPIPB4C9JG80 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NPIPB4C9JG80 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.42■■□□□ 1.02
NPIPB4C9JG80 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.42■■□□□ 1.02
NPIPB4C9JG80 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NPIPB4C9JG80 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.41■■□□□ 1.02
NPIPB4C9JG80 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.41■■□□□ 1.02
NPIPB4C9JG80 GPX1-201ENST00000419349 1106 ntBASIC21.41■■□□□ 1.02
NPIPB4C9JG80 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NPIPB4C9JG80 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NPIPB4C9JG80 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
NPIPB4C9JG80 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NPIPB4C9JG80 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NPIPB4C9JG80 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NPIPB4C9JG80 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
NPIPB4C9JG80 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
NPIPB4C9JG80 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.39■■□□□ 1.02
NPIPB4C9JG80 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms