Protein–RNA interactions for Protein: A0A0C4DH27

TRGV8, T-cell receptor gamma variable 8 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV8A0A0C4DH27 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRGV8A0A0C4DH27 LONRF2P2-201ENST00000439212 571 ntBASIC21.73■■□□□ 1.07
TRGV8A0A0C4DH27 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRGV8A0A0C4DH27 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
TRGV8A0A0C4DH27 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.73■■□□□ 1.07
TRGV8A0A0C4DH27 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRGV8A0A0C4DH27 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.73■■□□□ 1.07
TRGV8A0A0C4DH27 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRGV8A0A0C4DH27 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TRGV8A0A0C4DH27 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
TRGV8A0A0C4DH27 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.72■■□□□ 1.07
TRGV8A0A0C4DH27 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.72■■□□□ 1.07
TRGV8A0A0C4DH27 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRGV8A0A0C4DH27 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
TRGV8A0A0C4DH27 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRGV8A0A0C4DH27 KRT125P-201ENST00000546827 989 ntBASIC21.71■■□□□ 1.07
TRGV8A0A0C4DH27 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.71■■□□□ 1.07
TRGV8A0A0C4DH27 AC008406.3-201ENST00000620001 1374 ntBASIC21.71■■□□□ 1.07
TRGV8A0A0C4DH27 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
TRGV8A0A0C4DH27 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRGV8A0A0C4DH27 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRGV8A0A0C4DH27 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.7■■□□□ 1.06
TRGV8A0A0C4DH27 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRGV8A0A0C4DH27 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRGV8A0A0C4DH27 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRGV8A0A0C4DH27 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.69■■□□□ 1.06
TRGV8A0A0C4DH27 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRGV8A0A0C4DH27 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.69■■□□□ 1.06
TRGV8A0A0C4DH27 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.69■■□□□ 1.06
TRGV8A0A0C4DH27 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRGV8A0A0C4DH27 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRGV8A0A0C4DH27 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRGV8A0A0C4DH27 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.68■■□□□ 1.06
TRGV8A0A0C4DH27 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRGV8A0A0C4DH27 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
TRGV8A0A0C4DH27 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
TRGV8A0A0C4DH27 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRGV8A0A0C4DH27 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
TRGV8A0A0C4DH27 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.67■■□□□ 1.06
TRGV8A0A0C4DH27 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRGV8A0A0C4DH27 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRGV8A0A0C4DH27 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TRGV8A0A0C4DH27 BX664725.1-201ENST00000438252 379 ntBASIC21.67■■□□□ 1.06
TRGV8A0A0C4DH27 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.67■■□□□ 1.06
TRGV8A0A0C4DH27 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
TRGV8A0A0C4DH27 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRGV8A0A0C4DH27 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRGV8A0A0C4DH27 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.67■■□□□ 1.06
TRGV8A0A0C4DH27 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.67■■□□□ 1.06
TRGV8A0A0C4DH27 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRGV8A0A0C4DH27 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRGV8A0A0C4DH27 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRGV8A0A0C4DH27 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.66■■□□□ 1.06
TRGV8A0A0C4DH27 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRGV8A0A0C4DH27 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRGV8A0A0C4DH27 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
TRGV8A0A0C4DH27 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.65■■□□□ 1.06
TRGV8A0A0C4DH27 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.65■■□□□ 1.06
TRGV8A0A0C4DH27 MIR4787-201ENST00000607364 84 ntBASIC21.65■■□□□ 1.06
TRGV8A0A0C4DH27 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRGV8A0A0C4DH27 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRGV8A0A0C4DH27 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRGV8A0A0C4DH27 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRGV8A0A0C4DH27 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRGV8A0A0C4DH27 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
TRGV8A0A0C4DH27 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.64■■□□□ 1.05
TRGV8A0A0C4DH27 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRGV8A0A0C4DH27 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.64■■□□□ 1.05
TRGV8A0A0C4DH27 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRGV8A0A0C4DH27 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
TRGV8A0A0C4DH27 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRGV8A0A0C4DH27 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TRGV8A0A0C4DH27 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TRGV8A0A0C4DH27 KRT18P10-201ENST00000388836 1287 ntBASIC21.63■■□□□ 1.05
TRGV8A0A0C4DH27 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRGV8A0A0C4DH27 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.63■■□□□ 1.05
TRGV8A0A0C4DH27 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRGV8A0A0C4DH27 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRGV8A0A0C4DH27 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
TRGV8A0A0C4DH27 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.62■■□□□ 1.05
TRGV8A0A0C4DH27 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRGV8A0A0C4DH27 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRGV8A0A0C4DH27 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
TRGV8A0A0C4DH27 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRGV8A0A0C4DH27 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
TRGV8A0A0C4DH27 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRGV8A0A0C4DH27 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
TRGV8A0A0C4DH27 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
TRGV8A0A0C4DH27 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.61■■□□□ 1.05
TRGV8A0A0C4DH27 AC022616.5-201ENST00000518796 181 ntBASIC21.61■■□□□ 1.05
TRGV8A0A0C4DH27 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRGV8A0A0C4DH27 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRGV8A0A0C4DH27 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRGV8A0A0C4DH27 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
TRGV8A0A0C4DH27 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRGV8A0A0C4DH27 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRGV8A0A0C4DH27 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRGV8A0A0C4DH27 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
TRGV8A0A0C4DH27 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRGV8A0A0C4DH27 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms