Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
LOC102724428A0A0B4J2F2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
LOC102724428A0A0B4J2F2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
LOC102724428A0A0B4J2F2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
LOC102724428A0A0B4J2F2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
LOC102724428A0A0B4J2F2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
LOC102724428A0A0B4J2F2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC31.41■■■□□ 2.62
LOC102724428A0A0B4J2F2 MIR4787-201ENST00000607364 84 ntBASIC31.41■■■□□ 2.62
LOC102724428A0A0B4J2F2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
LOC102724428A0A0B4J2F2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
LOC102724428A0A0B4J2F2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
LOC102724428A0A0B4J2F2 KRT125P-201ENST00000546827 989 ntBASIC31.4■■■□□ 2.62
LOC102724428A0A0B4J2F2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
LOC102724428A0A0B4J2F2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
LOC102724428A0A0B4J2F2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
LOC102724428A0A0B4J2F2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
LOC102724428A0A0B4J2F2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC31.38■■■□□ 2.61
LOC102724428A0A0B4J2F2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
LOC102724428A0A0B4J2F2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
LOC102724428A0A0B4J2F2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC31.37■■■□□ 2.61
LOC102724428A0A0B4J2F2 BX664725.1-201ENST00000438252 379 ntBASIC31.37■■■□□ 2.61
LOC102724428A0A0B4J2F2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC31.37■■■□□ 2.61
LOC102724428A0A0B4J2F2 UNC93B8-201ENST00000511903 705 ntBASIC31.37■■■□□ 2.61
LOC102724428A0A0B4J2F2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC31.37■■■□□ 2.61
LOC102724428A0A0B4J2F2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC31.37■■■□□ 2.61
LOC102724428A0A0B4J2F2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
LOC102724428A0A0B4J2F2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
LOC102724428A0A0B4J2F2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
LOC102724428A0A0B4J2F2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
LOC102724428A0A0B4J2F2 MIR935-201ENST00000401179 91 ntBASIC31.36■■■□□ 2.61
LOC102724428A0A0B4J2F2 AC022616.5-201ENST00000518796 181 ntBASIC31.36■■■□□ 2.61
LOC102724428A0A0B4J2F2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.35■■■□□ 2.61
LOC102724428A0A0B4J2F2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
LOC102724428A0A0B4J2F2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC31.35■■■□□ 2.61
LOC102724428A0A0B4J2F2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC31.35■■■□□ 2.61
LOC102724428A0A0B4J2F2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC31.35■■■□□ 2.61
LOC102724428A0A0B4J2F2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
LOC102724428A0A0B4J2F2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
LOC102724428A0A0B4J2F2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC31.34■■■□□ 2.61
LOC102724428A0A0B4J2F2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
LOC102724428A0A0B4J2F2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
LOC102724428A0A0B4J2F2 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
LOC102724428A0A0B4J2F2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
LOC102724428A0A0B4J2F2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
LOC102724428A0A0B4J2F2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC31.33■■■□□ 2.61
LOC102724428A0A0B4J2F2 ABCB10P1-201ENST00000614297 2181 ntBASIC31.33■■■□□ 2.61
LOC102724428A0A0B4J2F2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
LOC102724428A0A0B4J2F2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC31.32■■■□□ 2.6
LOC102724428A0A0B4J2F2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
LOC102724428A0A0B4J2F2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
LOC102724428A0A0B4J2F2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
LOC102724428A0A0B4J2F2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC31.3■■■□□ 2.6
LOC102724428A0A0B4J2F2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC31.3■■■□□ 2.6
LOC102724428A0A0B4J2F2 KRT18P24-201ENST00000344739 1156 ntBASIC31.29■■■□□ 2.6
LOC102724428A0A0B4J2F2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC31.29■■■□□ 2.6
LOC102724428A0A0B4J2F2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
LOC102724428A0A0B4J2F2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
LOC102724428A0A0B4J2F2 KRT16P3-201ENST00000439127 1283 ntBASIC31.28■■■□□ 2.6
LOC102724428A0A0B4J2F2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC31.28■■■□□ 2.6
LOC102724428A0A0B4J2F2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
LOC102724428A0A0B4J2F2 KRT18P10-201ENST00000388836 1287 ntBASIC31.27■■■□□ 2.6
LOC102724428A0A0B4J2F2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
LOC102724428A0A0B4J2F2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
LOC102724428A0A0B4J2F2 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
LOC102724428A0A0B4J2F2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
LOC102724428A0A0B4J2F2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
LOC102724428A0A0B4J2F2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC31.26■■■□□ 2.59
LOC102724428A0A0B4J2F2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC31.26■■■□□ 2.59
LOC102724428A0A0B4J2F2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC31.26■■■□□ 2.59
LOC102724428A0A0B4J2F2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC31.26■■■□□ 2.59
LOC102724428A0A0B4J2F2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC31.26■■■□□ 2.59
LOC102724428A0A0B4J2F2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC31.26■■■□□ 2.59
LOC102724428A0A0B4J2F2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
LOC102724428A0A0B4J2F2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
LOC102724428A0A0B4J2F2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
LOC102724428A0A0B4J2F2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC31.25■■■□□ 2.59
LOC102724428A0A0B4J2F2 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC31.25■■■□□ 2.59
LOC102724428A0A0B4J2F2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
LOC102724428A0A0B4J2F2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC31.24■■■□□ 2.59
LOC102724428A0A0B4J2F2 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
LOC102724428A0A0B4J2F2 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
LOC102724428A0A0B4J2F2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
LOC102724428A0A0B4J2F2 AL449106.1-201ENST00000608517 1980 ntBASIC31.23■■■□□ 2.59
LOC102724428A0A0B4J2F2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC31.23■■■□□ 2.59
LOC102724428A0A0B4J2F2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC31.23■■■□□ 2.59
LOC102724428A0A0B4J2F2 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
LOC102724428A0A0B4J2F2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC31.23■■■□□ 2.59
LOC102724428A0A0B4J2F2 AC137630.3-201ENST00000607245 391 ntBASIC31.23■■■□□ 2.59
LOC102724428A0A0B4J2F2 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC31.23■■■□□ 2.59
LOC102724428A0A0B4J2F2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
LOC102724428A0A0B4J2F2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC31.22■■■□□ 2.59
LOC102724428A0A0B4J2F2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
LOC102724428A0A0B4J2F2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC31.21■■■□□ 2.59
LOC102724428A0A0B4J2F2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
LOC102724428A0A0B4J2F2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
LOC102724428A0A0B4J2F2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC31.19■■■□□ 2.58
LOC102724428A0A0B4J2F2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
LOC102724428A0A0B4J2F2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
LOC102724428A0A0B4J2F2 AC021242.3-201ENST00000607598 1377 ntBASIC31.18■■■□□ 2.58
LOC102724428A0A0B4J2F2 MIR638-201ENST00000385237 100 ntBASIC31.18■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms