Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.14■■□□□ 1.78
PCDHB4Q9Y5E5 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.14■■□□□ 1.78
PCDHB4Q9Y5E5 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
PCDHB4Q9Y5E5 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHB4Q9Y5E5 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PCDHB4Q9Y5E5 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
PCDHB4Q9Y5E5 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
PCDHB4Q9Y5E5 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
PCDHB4Q9Y5E5 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.14■■□□□ 1.77
PCDHB4Q9Y5E5 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.13■■□□□ 1.77
PCDHB4Q9Y5E5 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHB4Q9Y5E5 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.12■■□□□ 1.77
PCDHB4Q9Y5E5 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
PCDHB4Q9Y5E5 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHB4Q9Y5E5 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.11■■□□□ 1.77
PCDHB4Q9Y5E5 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.11■■□□□ 1.77
PCDHB4Q9Y5E5 AC091060.1-201ENST00000623524 1766 ntBASIC26.11■■□□□ 1.77
PCDHB4Q9Y5E5 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.11■■□□□ 1.77
PCDHB4Q9Y5E5 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.11■■□□□ 1.77
PCDHB4Q9Y5E5 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.11■■□□□ 1.77
PCDHB4Q9Y5E5 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHB4Q9Y5E5 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHB4Q9Y5E5 ECEL1P2-201ENST00000461596 1295 ntBASIC26.1■■□□□ 1.77
PCDHB4Q9Y5E5 SMPD5-203ENST00000639008 1464 ntBASIC26.1■■□□□ 1.77
PCDHB4Q9Y5E5 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHB4Q9Y5E5 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.09■■□□□ 1.77
PCDHB4Q9Y5E5 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHB4Q9Y5E5 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.09■■□□□ 1.77
PCDHB4Q9Y5E5 AC025884.2-201ENST00000553429 711 ntBASIC26.09■■□□□ 1.77
PCDHB4Q9Y5E5 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHB4Q9Y5E5 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHB4Q9Y5E5 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHB4Q9Y5E5 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHB4Q9Y5E5 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.07■■□□□ 1.76
PCDHB4Q9Y5E5 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHB4Q9Y5E5 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.07■■□□□ 1.76
PCDHB4Q9Y5E5 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
PCDHB4Q9Y5E5 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHB4Q9Y5E5 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHB4Q9Y5E5 AC092803.2-201ENST00000564287 1899 ntBASIC26.06■■□□□ 1.76
PCDHB4Q9Y5E5 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHB4Q9Y5E5 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.06■■□□□ 1.76
PCDHB4Q9Y5E5 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.06■■□□□ 1.76
PCDHB4Q9Y5E5 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.05■■□□□ 1.76
PCDHB4Q9Y5E5 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
PCDHB4Q9Y5E5 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHB4Q9Y5E5 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHB4Q9Y5E5 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
PCDHB4Q9Y5E5 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.04■■□□□ 1.76
PCDHB4Q9Y5E5 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHB4Q9Y5E5 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.04■■□□□ 1.76
PCDHB4Q9Y5E5 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.04■■□□□ 1.76
PCDHB4Q9Y5E5 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
PCDHB4Q9Y5E5 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHB4Q9Y5E5 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHB4Q9Y5E5 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.03■■□□□ 1.76
PCDHB4Q9Y5E5 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHB4Q9Y5E5 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.03■■□□□ 1.76
PCDHB4Q9Y5E5 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHB4Q9Y5E5 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.02■■□□□ 1.76
PCDHB4Q9Y5E5 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
PCDHB4Q9Y5E5 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.02■■□□□ 1.76
PCDHB4Q9Y5E5 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.02■■□□□ 1.76
PCDHB4Q9Y5E5 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHB4Q9Y5E5 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHB4Q9Y5E5 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.01■■□□□ 1.75
PCDHB4Q9Y5E5 MIR3960-201ENST00000583311 91 ntBASIC26.01■■□□□ 1.75
PCDHB4Q9Y5E5 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.01■■□□□ 1.75
PCDHB4Q9Y5E5 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26■■□□□ 1.75
PCDHB4Q9Y5E5 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26■■□□□ 1.75
PCDHB4Q9Y5E5 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26■■□□□ 1.75
PCDHB4Q9Y5E5 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26■■□□□ 1.75
PCDHB4Q9Y5E5 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
PCDHB4Q9Y5E5 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHB4Q9Y5E5 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHB4Q9Y5E5 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.99■■□□□ 1.75
PCDHB4Q9Y5E5 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHB4Q9Y5E5 AC145676.1-201ENST00000514988 2004 ntBASIC25.98■■□□□ 1.75
PCDHB4Q9Y5E5 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
PCDHB4Q9Y5E5 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHB4Q9Y5E5 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.98■■□□□ 1.75
PCDHB4Q9Y5E5 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHB4Q9Y5E5 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHB4Q9Y5E5 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.97■■□□□ 1.75
PCDHB4Q9Y5E5 RNF126P1-201ENST00000567452 1320 ntBASIC25.97■■□□□ 1.75
PCDHB4Q9Y5E5 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHB4Q9Y5E5 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.97■■□□□ 1.75
PCDHB4Q9Y5E5 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.97■■□□□ 1.75
PCDHB4Q9Y5E5 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHB4Q9Y5E5 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHB4Q9Y5E5 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHB4Q9Y5E5 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.96■■□□□ 1.75
PCDHB4Q9Y5E5 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHB4Q9Y5E5 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHB4Q9Y5E5 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHB4Q9Y5E5 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.96■■□□□ 1.75
PCDHB4Q9Y5E5 HSD17B1P1-201ENST00000590052 955 ntBASIC25.96■■□□□ 1.75
PCDHB4Q9Y5E5 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.96■■□□□ 1.75
PCDHB4Q9Y5E5 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHB4Q9Y5E5 ERN1-208ENST00000606895 2068 ntBASIC25.95■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms