Protein–RNA interactions for Protein: Q9HB31

SEBOX, Homeobox protein SEBOX, humanhuman

Predicted RBP Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEBOXQ9HB31 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SEBOXQ9HB31 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.56■□□□□ 0.88
SEBOXQ9HB31 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SEBOXQ9HB31 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SEBOXQ9HB31 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.55■□□□□ 0.88
SEBOXQ9HB31 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.55■□□□□ 0.88
SEBOXQ9HB31 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.55■□□□□ 0.88
SEBOXQ9HB31 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.55■□□□□ 0.88
SEBOXQ9HB31 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.55■□□□□ 0.88
SEBOXQ9HB31 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SEBOXQ9HB31 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SEBOXQ9HB31 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SEBOXQ9HB31 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SEBOXQ9HB31 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SEBOXQ9HB31 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SEBOXQ9HB31 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SEBOXQ9HB31 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SEBOXQ9HB31 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SEBOXQ9HB31 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SEBOXQ9HB31 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SEBOXQ9HB31 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SEBOXQ9HB31 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SEBOXQ9HB31 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
SEBOXQ9HB31 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.54■□□□□ 0.88
SEBOXQ9HB31 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SEBOXQ9HB31 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
SEBOXQ9HB31 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SEBOXQ9HB31 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.53■□□□□ 0.88
SEBOXQ9HB31 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.53■□□□□ 0.88
SEBOXQ9HB31 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SEBOXQ9HB31 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SEBOXQ9HB31 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SEBOXQ9HB31 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.52■□□□□ 0.88
SEBOXQ9HB31 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.52■□□□□ 0.88
SEBOXQ9HB31 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEBOXQ9HB31 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SEBOXQ9HB31 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SEBOXQ9HB31 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.51■□□□□ 0.87
SEBOXQ9HB31 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SEBOXQ9HB31 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SEBOXQ9HB31 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SEBOXQ9HB31 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.5■□□□□ 0.87
SEBOXQ9HB31 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEBOXQ9HB31 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SEBOXQ9HB31 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEBOXQ9HB31 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SEBOXQ9HB31 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.49■□□□□ 0.87
SEBOXQ9HB31 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEBOXQ9HB31 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.48■□□□□ 0.87
SEBOXQ9HB31 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEBOXQ9HB31 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.48■□□□□ 0.87
SEBOXQ9HB31 AL359504.2-201ENST00000605506 1601 ntBASIC20.48■□□□□ 0.87
SEBOXQ9HB31 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.48■□□□□ 0.87
SEBOXQ9HB31 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEBOXQ9HB31 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEBOXQ9HB31 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEBOXQ9HB31 AC091060.1-201ENST00000623524 1766 ntBASIC20.47■□□□□ 0.87
SEBOXQ9HB31 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEBOXQ9HB31 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEBOXQ9HB31 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.47■□□□□ 0.87
SEBOXQ9HB31 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SEBOXQ9HB31 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.47■□□□□ 0.87
SEBOXQ9HB31 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEBOXQ9HB31 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SEBOXQ9HB31 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEBOXQ9HB31 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SEBOXQ9HB31 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEBOXQ9HB31 MIR4449-201ENST00000578365 66 ntBASIC20.46■□□□□ 0.87
SEBOXQ9HB31 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.46■□□□□ 0.87
SEBOXQ9HB31 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SEBOXQ9HB31 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEBOXQ9HB31 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SEBOXQ9HB31 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.87
SEBOXQ9HB31 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.87
SEBOXQ9HB31 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
SEBOXQ9HB31 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
SEBOXQ9HB31 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEBOXQ9HB31 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SEBOXQ9HB31 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEBOXQ9HB31 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.45■□□□□ 0.86
SEBOXQ9HB31 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEBOXQ9HB31 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.45■□□□□ 0.86
SEBOXQ9HB31 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.45■□□□□ 0.86
SEBOXQ9HB31 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEBOXQ9HB31 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEBOXQ9HB31 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEBOXQ9HB31 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.44■□□□□ 0.86
SEBOXQ9HB31 AC145676.1-201ENST00000514988 2004 ntBASIC20.44■□□□□ 0.86
SEBOXQ9HB31 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEBOXQ9HB31 AC060814.1-201ENST00000554326 538 ntBASIC20.44■□□□□ 0.86
SEBOXQ9HB31 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEBOXQ9HB31 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SEBOXQ9HB31 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEBOXQ9HB31 DUSP8P4-201ENST00000399538 1761 ntBASIC20.44■□□□□ 0.86
SEBOXQ9HB31 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SEBOXQ9HB31 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.43■□□□□ 0.86
SEBOXQ9HB31 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SEBOXQ9HB31 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SEBOXQ9HB31 AC092803.2-201ENST00000564287 1899 ntBASIC20.43■□□□□ 0.86
SEBOXQ9HB31 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms