Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC30.15■■■□□ 2.42
RTFDC1Q9BY42 WHAMMP3-201ENST00000611636 1609 ntBASIC30.14■■■□□ 2.42
RTFDC1Q9BY42 AL356441.2-201ENST00000443009 864 ntBASIC30.14■■■□□ 2.42
RTFDC1Q9BY42 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC30.14■■■□□ 2.42
RTFDC1Q9BY42 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.14■■■□□ 2.42
RTFDC1Q9BY42 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.42
RTFDC1Q9BY42 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
RTFDC1Q9BY42 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
RTFDC1Q9BY42 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
RTFDC1Q9BY42 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC30.13■■■□□ 2.41
RTFDC1Q9BY42 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
RTFDC1Q9BY42 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
RTFDC1Q9BY42 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC30.13■■■□□ 2.41
RTFDC1Q9BY42 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
RTFDC1Q9BY42 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
RTFDC1Q9BY42 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
RTFDC1Q9BY42 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
RTFDC1Q9BY42 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
RTFDC1Q9BY42 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RTFDC1Q9BY42 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC30.11■■■□□ 2.41
RTFDC1Q9BY42 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC30.11■■■□□ 2.41
RTFDC1Q9BY42 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
RTFDC1Q9BY42 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC30.1■■■□□ 2.41
RTFDC1Q9BY42 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
RTFDC1Q9BY42 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RTFDC1Q9BY42 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
RTFDC1Q9BY42 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
RTFDC1Q9BY42 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
RTFDC1Q9BY42 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC30.09■■■□□ 2.41
RTFDC1Q9BY42 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC30.09■■■□□ 2.41
RTFDC1Q9BY42 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC30.09■■■□□ 2.41
RTFDC1Q9BY42 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC30.09■■■□□ 2.41
RTFDC1Q9BY42 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
RTFDC1Q9BY42 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
RTFDC1Q9BY42 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
RTFDC1Q9BY42 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
RTFDC1Q9BY42 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
RTFDC1Q9BY42 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
RTFDC1Q9BY42 LONRF2P2-201ENST00000439212 571 ntBASIC30.07■■■□□ 2.4
RTFDC1Q9BY42 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC30.07■■■□□ 2.4
RTFDC1Q9BY42 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC30.07■■■□□ 2.4
RTFDC1Q9BY42 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
RTFDC1Q9BY42 RNF146-205ENST00000477776 762 ntTSL 3 BASIC30.06■■■□□ 2.4
RTFDC1Q9BY42 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
RTFDC1Q9BY42 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
RTFDC1Q9BY42 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC30.05■■■□□ 2.4
RTFDC1Q9BY42 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
RTFDC1Q9BY42 RPS2P7-201ENST00000447334 885 ntBASIC30.05■■■□□ 2.4
RTFDC1Q9BY42 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC30.05■■■□□ 2.4
RTFDC1Q9BY42 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC30.05■■■□□ 2.4
RTFDC1Q9BY42 AC239859.2-201ENST00000444165 318 ntBASIC30.04■■■□□ 2.4
RTFDC1Q9BY42 TK2-216ENST00000564917 1156 ntTSL 3 BASIC30.04■■■□□ 2.4
RTFDC1Q9BY42 Z92544.1-202ENST00000571933 1220 ntBASIC30.04■■■□□ 2.4
RTFDC1Q9BY42 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
RTFDC1Q9BY42 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RTFDC1Q9BY42 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC30.03■■■□□ 2.4
RTFDC1Q9BY42 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RTFDC1Q9BY42 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC30.03■■■□□ 2.4
RTFDC1Q9BY42 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC30.03■■■□□ 2.4
RTFDC1Q9BY42 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RTFDC1Q9BY42 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
RTFDC1Q9BY42 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RTFDC1Q9BY42 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.02■■■□□ 2.4
RTFDC1Q9BY42 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC30.02■■■□□ 2.4
RTFDC1Q9BY42 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
RTFDC1Q9BY42 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
RTFDC1Q9BY42 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC30.02■■■□□ 2.4
RTFDC1Q9BY42 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
RTFDC1Q9BY42 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
RTFDC1Q9BY42 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
RTFDC1Q9BY42 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC30.01■■■□□ 2.4
RTFDC1Q9BY42 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC30.01■■■□□ 2.4
RTFDC1Q9BY42 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
RTFDC1Q9BY42 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
RTFDC1Q9BY42 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
RTFDC1Q9BY42 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC29.99■■■□□ 2.39
RTFDC1Q9BY42 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
RTFDC1Q9BY42 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
RTFDC1Q9BY42 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC29.99■■■□□ 2.39
RTFDC1Q9BY42 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC29.99■■■□□ 2.39
RTFDC1Q9BY42 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
RTFDC1Q9BY42 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC29.98■■■□□ 2.39
RTFDC1Q9BY42 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
RTFDC1Q9BY42 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
RTFDC1Q9BY42 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC29.97■■■□□ 2.39
RTFDC1Q9BY42 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC29.97■■■□□ 2.39
RTFDC1Q9BY42 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC29.97■■■□□ 2.39
RTFDC1Q9BY42 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
RTFDC1Q9BY42 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
RTFDC1Q9BY42 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
RTFDC1Q9BY42 CREM-229ENST00000474362 1030 ntTSL 2 BASIC29.96■■■□□ 2.39
RTFDC1Q9BY42 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC29.96■■■□□ 2.39
RTFDC1Q9BY42 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
RTFDC1Q9BY42 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC29.95■■■□□ 2.39
RTFDC1Q9BY42 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC29.95■■■□□ 2.39
RTFDC1Q9BY42 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC29.95■■■□□ 2.39
RTFDC1Q9BY42 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
RTFDC1Q9BY42 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
RTFDC1Q9BY42 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
RTFDC1Q9BY42 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms