Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TMEFF1Q8IYR6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TMEFF1Q8IYR6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TMEFF1Q8IYR6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.48■■□□□ 1.51
TMEFF1Q8IYR6 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
TMEFF1Q8IYR6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.48■■□□□ 1.51
TMEFF1Q8IYR6 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TMEFF1Q8IYR6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TMEFF1Q8IYR6 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TMEFF1Q8IYR6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
TMEFF1Q8IYR6 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TMEFF1Q8IYR6 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TMEFF1Q8IYR6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
TMEFF1Q8IYR6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
TMEFF1Q8IYR6 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
TMEFF1Q8IYR6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
TMEFF1Q8IYR6 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TMEFF1Q8IYR6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
TMEFF1Q8IYR6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
TMEFF1Q8IYR6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.45■■□□□ 1.5
TMEFF1Q8IYR6 WHAMMP3-201ENST00000611636 1609 ntBASIC24.45■■□□□ 1.5
TMEFF1Q8IYR6 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TMEFF1Q8IYR6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.44■■□□□ 1.5
TMEFF1Q8IYR6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
TMEFF1Q8IYR6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.44■■□□□ 1.5
TMEFF1Q8IYR6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
TMEFF1Q8IYR6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TMEFF1Q8IYR6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC24.43■■□□□ 1.5
TMEFF1Q8IYR6 AL356441.2-201ENST00000443009 864 ntBASIC24.43■■□□□ 1.5
TMEFF1Q8IYR6 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.43■■□□□ 1.5
TMEFF1Q8IYR6 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TMEFF1Q8IYR6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMEFF1Q8IYR6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC24.42■■□□□ 1.5
TMEFF1Q8IYR6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMEFF1Q8IYR6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC24.42■■□□□ 1.5
TMEFF1Q8IYR6 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.42■■□□□ 1.5
TMEFF1Q8IYR6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMEFF1Q8IYR6 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMEFF1Q8IYR6 AC239859.2-201ENST00000444165 318 ntBASIC24.41■■□□□ 1.5
TMEFF1Q8IYR6 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TMEFF1Q8IYR6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TMEFF1Q8IYR6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
TMEFF1Q8IYR6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.4■■□□□ 1.5
TMEFF1Q8IYR6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.4■■□□□ 1.5
TMEFF1Q8IYR6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.4■■□□□ 1.5
TMEFF1Q8IYR6 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.4■■□□□ 1.5
TMEFF1Q8IYR6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
TMEFF1Q8IYR6 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
TMEFF1Q8IYR6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
TMEFF1Q8IYR6 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
TMEFF1Q8IYR6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
TMEFF1Q8IYR6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TMEFF1Q8IYR6 AC019171.1-201ENST00000601251 1056 ntBASIC24.39■■□□□ 1.49
TMEFF1Q8IYR6 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TMEFF1Q8IYR6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
TMEFF1Q8IYR6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.38■■□□□ 1.49
TMEFF1Q8IYR6 AC087393.1-201ENST00000582896 145 ntBASIC24.38■■□□□ 1.49
TMEFF1Q8IYR6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC24.38■■□□□ 1.49
TMEFF1Q8IYR6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.38■■□□□ 1.49
TMEFF1Q8IYR6 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TMEFF1Q8IYR6 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
TMEFF1Q8IYR6 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TMEFF1Q8IYR6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
TMEFF1Q8IYR6 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TMEFF1Q8IYR6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.37■■□□□ 1.49
TMEFF1Q8IYR6 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TMEFF1Q8IYR6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.36■■□□□ 1.49
TMEFF1Q8IYR6 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TMEFF1Q8IYR6 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TMEFF1Q8IYR6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.35■■□□□ 1.49
TMEFF1Q8IYR6 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TMEFF1Q8IYR6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.35■■□□□ 1.49
TMEFF1Q8IYR6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.34■■□□□ 1.49
TMEFF1Q8IYR6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.34■■□□□ 1.49
TMEFF1Q8IYR6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.34■■□□□ 1.49
TMEFF1Q8IYR6 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TMEFF1Q8IYR6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TMEFF1Q8IYR6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.33■■□□□ 1.49
TMEFF1Q8IYR6 RPS2P7-201ENST00000447334 885 ntBASIC24.33■■□□□ 1.49
TMEFF1Q8IYR6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC24.33■■□□□ 1.49
TMEFF1Q8IYR6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
TMEFF1Q8IYR6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
TMEFF1Q8IYR6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.33■■□□□ 1.48
TMEFF1Q8IYR6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
TMEFF1Q8IYR6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TMEFF1Q8IYR6 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TMEFF1Q8IYR6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.32■■□□□ 1.48
TMEFF1Q8IYR6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.32■■□□□ 1.48
TMEFF1Q8IYR6 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
TMEFF1Q8IYR6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
TMEFF1Q8IYR6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
TMEFF1Q8IYR6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
TMEFF1Q8IYR6 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TMEFF1Q8IYR6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TMEFF1Q8IYR6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TMEFF1Q8IYR6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TMEFF1Q8IYR6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
TMEFF1Q8IYR6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
TMEFF1Q8IYR6 LONRF2P2-201ENST00000439212 571 ntBASIC24.3■■□□□ 1.48
TMEFF1Q8IYR6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms