Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RNF135Q8IUD6 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
RNF135Q8IUD6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
RNF135Q8IUD6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.91■■□□□ 1.74
RNF135Q8IUD6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.91■■□□□ 1.74
RNF135Q8IUD6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
RNF135Q8IUD6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.91■■□□□ 1.74
RNF135Q8IUD6 IDNK-201ENST00000376417 511 ntTSL 5 BASIC25.9■■□□□ 1.74
RNF135Q8IUD6 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RNF135Q8IUD6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.9■■□□□ 1.74
RNF135Q8IUD6 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
RNF135Q8IUD6 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
RNF135Q8IUD6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
RNF135Q8IUD6 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.89■■□□□ 1.73
RNF135Q8IUD6 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RNF135Q8IUD6 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.88■■□□□ 1.73
RNF135Q8IUD6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RNF135Q8IUD6 AC239859.2-201ENST00000444165 318 ntBASIC25.88■■□□□ 1.73
RNF135Q8IUD6 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RNF135Q8IUD6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RNF135Q8IUD6 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
RNF135Q8IUD6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
RNF135Q8IUD6 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC25.87■■□□□ 1.73
RNF135Q8IUD6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RNF135Q8IUD6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.87■■□□□ 1.73
RNF135Q8IUD6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.86■■□□□ 1.73
RNF135Q8IUD6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.86■■□□□ 1.73
RNF135Q8IUD6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC25.86■■□□□ 1.73
RNF135Q8IUD6 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RNF135Q8IUD6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RNF135Q8IUD6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.85■■□□□ 1.73
RNF135Q8IUD6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RNF135Q8IUD6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
RNF135Q8IUD6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RNF135Q8IUD6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.85■■□□□ 1.73
RNF135Q8IUD6 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RNF135Q8IUD6 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RNF135Q8IUD6 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
RNF135Q8IUD6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
RNF135Q8IUD6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
RNF135Q8IUD6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC25.84■■□□□ 1.73
RNF135Q8IUD6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RNF135Q8IUD6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RNF135Q8IUD6 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RNF135Q8IUD6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
RNF135Q8IUD6 MIR3960-201ENST00000583311 91 ntBASIC25.83■■□□□ 1.73
RNF135Q8IUD6 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.82■■□□□ 1.72
RNF135Q8IUD6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.82■■□□□ 1.72
RNF135Q8IUD6 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RNF135Q8IUD6 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.81■■□□□ 1.72
RNF135Q8IUD6 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RNF135Q8IUD6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC25.81■■□□□ 1.72
RNF135Q8IUD6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC25.81■■□□□ 1.72
RNF135Q8IUD6 MTX2-204ENST00000443241 799 ntTSL 3 BASIC25.81■■□□□ 1.72
RNF135Q8IUD6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC25.81■■□□□ 1.72
RNF135Q8IUD6 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.81■■□□□ 1.72
RNF135Q8IUD6 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RNF135Q8IUD6 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RNF135Q8IUD6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
RNF135Q8IUD6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
RNF135Q8IUD6 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC25.8■■□□□ 1.72
RNF135Q8IUD6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.8■■□□□ 1.72
RNF135Q8IUD6 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
RNF135Q8IUD6 GRAMD4P7-201ENST00000578182 1232 ntBASIC25.8■■□□□ 1.72
RNF135Q8IUD6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
RNF135Q8IUD6 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RNF135Q8IUD6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RNF135Q8IUD6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.79■■□□□ 1.72
RNF135Q8IUD6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
RNF135Q8IUD6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RNF135Q8IUD6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
RNF135Q8IUD6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC25.78■■□□□ 1.72
RNF135Q8IUD6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.77■■□□□ 1.72
RNF135Q8IUD6 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RNF135Q8IUD6 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
RNF135Q8IUD6 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RNF135Q8IUD6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
RNF135Q8IUD6 DRD5P2-201ENST00000421395 2012 ntBASIC25.76■■□□□ 1.72
RNF135Q8IUD6 MIR638-201ENST00000385237 100 ntBASIC25.76■■□□□ 1.71
RNF135Q8IUD6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC25.76■■□□□ 1.71
RNF135Q8IUD6 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RNF135Q8IUD6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.76■■□□□ 1.71
RNF135Q8IUD6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC25.76■■□□□ 1.71
RNF135Q8IUD6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RNF135Q8IUD6 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
RNF135Q8IUD6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
RNF135Q8IUD6 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
RNF135Q8IUD6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC25.75■■□□□ 1.71
RNF135Q8IUD6 Z92544.1-202ENST00000571933 1220 ntBASIC25.75■■□□□ 1.71
RNF135Q8IUD6 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
RNF135Q8IUD6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
RNF135Q8IUD6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RNF135Q8IUD6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC25.74■■□□□ 1.71
RNF135Q8IUD6 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.74■■□□□ 1.71
RNF135Q8IUD6 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RNF135Q8IUD6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RNF135Q8IUD6 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
RNF135Q8IUD6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.73■■□□□ 1.71
RNF135Q8IUD6 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC25.73■■□□□ 1.71
RNF135Q8IUD6 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms