Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.41■■□□□ 1.02
RTTNQ86VV8 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTTNQ86VV8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
RTTNQ86VV8 AC025884.2-201ENST00000553429 711 ntBASIC21.4■■□□□ 1.02
RTTNQ86VV8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RTTNQ86VV8 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
RTTNQ86VV8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
RTTNQ86VV8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
RTTNQ86VV8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTTNQ86VV8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RTTNQ86VV8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTTNQ86VV8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTTNQ86VV8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RTTNQ86VV8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RTTNQ86VV8 AL157400.5-201ENST00000507624 621 ntBASIC21.39■■□□□ 1.01
RTTNQ86VV8 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTTNQ86VV8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RTTNQ86VV8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RTTNQ86VV8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
RTTNQ86VV8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTTNQ86VV8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RTTNQ86VV8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RTTNQ86VV8 AP004609.3-201ENST00000610705 1884 ntBASIC21.37■■□□□ 1.01
RTTNQ86VV8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTTNQ86VV8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTTNQ86VV8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTTNQ86VV8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTTNQ86VV8 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTTNQ86VV8 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RTTNQ86VV8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.36■■□□□ 1.01
RTTNQ86VV8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RTTNQ86VV8 RARRES2P1-201ENST00000474487 481 ntBASIC21.36■■□□□ 1.01
RTTNQ86VV8 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTTNQ86VV8 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTTNQ86VV8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTTNQ86VV8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.35■■□□□ 1.01
RTTNQ86VV8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
RTTNQ86VV8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTTNQ86VV8 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.35■■□□□ 1.01
RTTNQ86VV8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.34■■□□□ 1.01
RTTNQ86VV8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.34■■□□□ 1.01
RTTNQ86VV8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.34■■□□□ 1.01
RTTNQ86VV8 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RTTNQ86VV8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.33■■□□□ 1.01
RTTNQ86VV8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.33■■□□□ 1
RTTNQ86VV8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
RTTNQ86VV8 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RTTNQ86VV8 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RTTNQ86VV8 AC022413.1-201ENST00000624602 984 ntBASIC21.32■■□□□ 1
RTTNQ86VV8 ERN1-208ENST00000606895 2068 ntBASIC21.32■■□□□ 1
RTTNQ86VV8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.32■■□□□ 1
RTTNQ86VV8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RTTNQ86VV8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTTNQ86VV8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.31■■□□□ 1
RTTNQ86VV8 AL359504.2-201ENST00000605506 1601 ntBASIC21.31■■□□□ 1
RTTNQ86VV8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.31■■□□□ 1
RTTNQ86VV8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.31■■□□□ 1
RTTNQ86VV8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.31■■□□□ 1
RTTNQ86VV8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RTTNQ86VV8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTTNQ86VV8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RTTNQ86VV8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.31■■□□□ 1
RTTNQ86VV8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTTNQ86VV8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.3■■□□□ 1
RTTNQ86VV8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTTNQ86VV8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.3■■□□□ 1
RTTNQ86VV8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.3■■□□□ 1
RTTNQ86VV8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTTNQ86VV8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.3■■□□□ 1
RTTNQ86VV8 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTTNQ86VV8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTTNQ86VV8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RTTNQ86VV8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RTTNQ86VV8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RTTNQ86VV8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RTTNQ86VV8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.28■■□□□ 1
RTTNQ86VV8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
RTTNQ86VV8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.28■■□□□ 1
RTTNQ86VV8 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.28■■□□□ 1
RTTNQ86VV8 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.28■■□□□ 1
RTTNQ86VV8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.28■■□□□ 1
RTTNQ86VV8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.28■■□□□ 1
RTTNQ86VV8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTTNQ86VV8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.27■■□□□ 1
RTTNQ86VV8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTTNQ86VV8 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.27■■□□□ 1
RTTNQ86VV8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RTTNQ86VV8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.27■□□□□ 0.99
RTTNQ86VV8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTTNQ86VV8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTTNQ86VV8 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTTNQ86VV8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RTTNQ86VV8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RTTNQ86VV8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.26■□□□□ 0.99
RTTNQ86VV8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.25■□□□□ 0.99
RTTNQ86VV8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.25■□□□□ 0.99
RTTNQ86VV8 AC142472.1-201ENST00000612013 1741 ntBASIC21.25■□□□□ 0.99
RTTNQ86VV8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTTNQ86VV8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.25■□□□□ 0.99
RTTNQ86VV8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms