Protein–RNA interactions for Protein: Q86UC2

RSPH3, Radial spoke head protein 3 homolog, humanhuman

Predictions only

Length 560 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPH3Q86UC2 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
RSPH3Q86UC2 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
RSPH3Q86UC2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC26.97■■□□□ 1.91
RSPH3Q86UC2 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
RSPH3Q86UC2 DRD5P2-201ENST00000421395 2012 ntBASIC26.97■■□□□ 1.91
RSPH3Q86UC2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.96■■□□□ 1.91
RSPH3Q86UC2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RSPH3Q86UC2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC26.96■■□□□ 1.91
RSPH3Q86UC2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
RSPH3Q86UC2 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC26.96■■□□□ 1.91
RSPH3Q86UC2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
RSPH3Q86UC2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.96■■□□□ 1.91
RSPH3Q86UC2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.91
RSPH3Q86UC2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
RSPH3Q86UC2 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.95■■□□□ 1.91
RSPH3Q86UC2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
RSPH3Q86UC2 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
RSPH3Q86UC2 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.95■■□□□ 1.9
RSPH3Q86UC2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC26.95■■□□□ 1.9
RSPH3Q86UC2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.95■■□□□ 1.9
RSPH3Q86UC2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC26.94■■□□□ 1.9
RSPH3Q86UC2 AC103834.1-201ENST00000520383 144 ntBASIC26.94■■□□□ 1.9
RSPH3Q86UC2 PVT1_1.1-201ENST00000615125 194 ntBASIC26.94■■□□□ 1.9
RSPH3Q86UC2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RSPH3Q86UC2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.94■■□□□ 1.9
RSPH3Q86UC2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
RSPH3Q86UC2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RSPH3Q86UC2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.93■■□□□ 1.9
RSPH3Q86UC2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.93■■□□□ 1.9
RSPH3Q86UC2 MIR4508-201ENST00000584178 70 ntBASIC26.93■■□□□ 1.9
RSPH3Q86UC2 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RSPH3Q86UC2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.92■■□□□ 1.9
RSPH3Q86UC2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
RSPH3Q86UC2 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RSPH3Q86UC2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RSPH3Q86UC2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
RSPH3Q86UC2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.91■■□□□ 1.9
RSPH3Q86UC2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RSPH3Q86UC2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.91■■□□□ 1.9
RSPH3Q86UC2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RSPH3Q86UC2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RSPH3Q86UC2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RSPH3Q86UC2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
RSPH3Q86UC2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
RSPH3Q86UC2 AL449106.1-201ENST00000608517 1980 ntBASIC26.89■■□□□ 1.89
RSPH3Q86UC2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.89
RSPH3Q86UC2 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.88■■□□□ 1.89
RSPH3Q86UC2 LINC01003-201ENST00000564834 1764 ntBASIC26.88■■□□□ 1.89
RSPH3Q86UC2 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RSPH3Q86UC2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RSPH3Q86UC2 AC009299.2-201ENST00000482477 511 ntBASIC26.87■■□□□ 1.89
RSPH3Q86UC2 AC087393.1-201ENST00000582896 145 ntBASIC26.87■■□□□ 1.89
RSPH3Q86UC2 AC019171.1-201ENST00000601251 1056 ntBASIC26.87■■□□□ 1.89
RSPH3Q86UC2 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RSPH3Q86UC2 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RSPH3Q86UC2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.86■■□□□ 1.89
RSPH3Q86UC2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.86■■□□□ 1.89
RSPH3Q86UC2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
RSPH3Q86UC2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
RSPH3Q86UC2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
RSPH3Q86UC2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RSPH3Q86UC2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RSPH3Q86UC2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC26.85■■□□□ 1.89
RSPH3Q86UC2 AC139426.1-201ENST00000568218 2529 ntBASIC26.85■■□□□ 1.89
RSPH3Q86UC2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.85■■□□□ 1.89
RSPH3Q86UC2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
RSPH3Q86UC2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
RSPH3Q86UC2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
RSPH3Q86UC2 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.83■■□□□ 1.89
RSPH3Q86UC2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
RSPH3Q86UC2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RSPH3Q86UC2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
RSPH3Q86UC2 KRT18P10-201ENST00000388836 1287 ntBASIC26.83■■□□□ 1.89
RSPH3Q86UC2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.83■■□□□ 1.89
RSPH3Q86UC2 RPS2P7-201ENST00000447334 885 ntBASIC26.83■■□□□ 1.89
RSPH3Q86UC2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
RSPH3Q86UC2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
RSPH3Q86UC2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
RSPH3Q86UC2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RSPH3Q86UC2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.83■■□□□ 1.88
RSPH3Q86UC2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RSPH3Q86UC2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RSPH3Q86UC2 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
RSPH3Q86UC2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RSPH3Q86UC2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC26.82■■□□□ 1.88
RSPH3Q86UC2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
RSPH3Q86UC2 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RSPH3Q86UC2 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RSPH3Q86UC2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.81■■□□□ 1.88
RSPH3Q86UC2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RSPH3Q86UC2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
RSPH3Q86UC2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.81■■□□□ 1.88
RSPH3Q86UC2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
RSPH3Q86UC2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
RSPH3Q86UC2 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
RSPH3Q86UC2 AL031848.2-201ENST00000607670 837 ntBASIC26.8■■□□□ 1.88
RSPH3Q86UC2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.8■■□□□ 1.88
RSPH3Q86UC2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RSPH3Q86UC2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
RSPH3Q86UC2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms