Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 ERN1-208ENST00000606895 2068 ntBASIC26.71■■□□□ 1.87
FOXR2Q6PJQ5 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
FOXR2Q6PJQ5 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
FOXR2Q6PJQ5 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
FOXR2Q6PJQ5 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
FOXR2Q6PJQ5 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.7■■□□□ 1.86
FOXR2Q6PJQ5 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.86
FOXR2Q6PJQ5 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
FOXR2Q6PJQ5 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
FOXR2Q6PJQ5 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
FOXR2Q6PJQ5 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
FOXR2Q6PJQ5 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
FOXR2Q6PJQ5 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
FOXR2Q6PJQ5 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
FOXR2Q6PJQ5 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.69■■□□□ 1.86
FOXR2Q6PJQ5 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
FOXR2Q6PJQ5 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.68■■□□□ 1.86
FOXR2Q6PJQ5 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
FOXR2Q6PJQ5 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.68■■□□□ 1.86
FOXR2Q6PJQ5 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
FOXR2Q6PJQ5 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
FOXR2Q6PJQ5 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.68■■□□□ 1.86
FOXR2Q6PJQ5 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.68■■□□□ 1.86
FOXR2Q6PJQ5 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
FOXR2Q6PJQ5 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.67■■□□□ 1.86
FOXR2Q6PJQ5 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.67■■□□□ 1.86
FOXR2Q6PJQ5 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
FOXR2Q6PJQ5 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
FOXR2Q6PJQ5 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.66■■□□□ 1.86
FOXR2Q6PJQ5 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
FOXR2Q6PJQ5 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
FOXR2Q6PJQ5 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.66■■□□□ 1.86
FOXR2Q6PJQ5 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
FOXR2Q6PJQ5 MIR7108-201ENST00000614319 87 ntBASIC26.65■■□□□ 1.86
FOXR2Q6PJQ5 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.65■■□□□ 1.86
FOXR2Q6PJQ5 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
FOXR2Q6PJQ5 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
FOXR2Q6PJQ5 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.86
FOXR2Q6PJQ5 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
FOXR2Q6PJQ5 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
FOXR2Q6PJQ5 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
FOXR2Q6PJQ5 MIR639-201ENST00000384974 98 ntBASIC26.63■■□□□ 1.85
FOXR2Q6PJQ5 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
FOXR2Q6PJQ5 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.63■■□□□ 1.85
FOXR2Q6PJQ5 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
FOXR2Q6PJQ5 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.63■■□□□ 1.85
FOXR2Q6PJQ5 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
FOXR2Q6PJQ5 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
FOXR2Q6PJQ5 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.62■■□□□ 1.85
FOXR2Q6PJQ5 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.61■■□□□ 1.85
FOXR2Q6PJQ5 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
FOXR2Q6PJQ5 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
FOXR2Q6PJQ5 AC096887.2-201ENST00000623443 1957 ntBASIC26.61■■□□□ 1.85
FOXR2Q6PJQ5 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
FOXR2Q6PJQ5 AL157400.5-201ENST00000507624 621 ntBASIC26.61■■□□□ 1.85
FOXR2Q6PJQ5 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.61■■□□□ 1.85
FOXR2Q6PJQ5 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.61■■□□□ 1.85
FOXR2Q6PJQ5 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.61■■□□□ 1.85
FOXR2Q6PJQ5 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
FOXR2Q6PJQ5 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
FOXR2Q6PJQ5 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
FOXR2Q6PJQ5 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
FOXR2Q6PJQ5 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
FOXR2Q6PJQ5 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
FOXR2Q6PJQ5 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
FOXR2Q6PJQ5 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
FOXR2Q6PJQ5 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
FOXR2Q6PJQ5 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.6■■□□□ 1.85
FOXR2Q6PJQ5 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
FOXR2Q6PJQ5 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
FOXR2Q6PJQ5 AC025884.2-201ENST00000553429 711 ntBASIC26.59■■□□□ 1.85
FOXR2Q6PJQ5 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
FOXR2Q6PJQ5 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.59■■□□□ 1.85
FOXR2Q6PJQ5 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
FOXR2Q6PJQ5 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
FOXR2Q6PJQ5 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
FOXR2Q6PJQ5 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
FOXR2Q6PJQ5 AC060814.1-201ENST00000554326 538 ntBASIC26.58■■□□□ 1.85
FOXR2Q6PJQ5 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
FOXR2Q6PJQ5 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
FOXR2Q6PJQ5 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
FOXR2Q6PJQ5 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.57■■□□□ 1.84
FOXR2Q6PJQ5 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.57■■□□□ 1.84
FOXR2Q6PJQ5 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.57■■□□□ 1.84
FOXR2Q6PJQ5 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.57■■□□□ 1.84
FOXR2Q6PJQ5 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
FOXR2Q6PJQ5 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
FOXR2Q6PJQ5 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
FOXR2Q6PJQ5 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
FOXR2Q6PJQ5 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
FOXR2Q6PJQ5 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.56■■□□□ 1.84
FOXR2Q6PJQ5 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
FOXR2Q6PJQ5 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
FOXR2Q6PJQ5 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
FOXR2Q6PJQ5 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.55■■□□□ 1.84
FOXR2Q6PJQ5 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
FOXR2Q6PJQ5 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
FOXR2Q6PJQ5 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
FOXR2Q6PJQ5 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.54■■□□□ 1.84
FOXR2Q6PJQ5 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms