Protein–RNA interactions for Protein: Q5TCZ1

SH3PXD2A, SH3 and PX domain-containing protein 2A, humanhuman

Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2AQ5TCZ1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
SH3PXD2AQ5TCZ1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SH3PXD2AQ5TCZ1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SH3PXD2AQ5TCZ1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SH3PXD2AQ5TCZ1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SH3PXD2AQ5TCZ1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.59■■□□□ 1.69
SH3PXD2AQ5TCZ1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SH3PXD2AQ5TCZ1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC25.59■■□□□ 1.69
SH3PXD2AQ5TCZ1 AL033527.3-201ENST00000566366 1196 ntBASIC25.59■■□□□ 1.69
SH3PXD2AQ5TCZ1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SH3PXD2AQ5TCZ1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SH3PXD2AQ5TCZ1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SH3PXD2AQ5TCZ1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SH3PXD2AQ5TCZ1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SH3PXD2AQ5TCZ1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SH3PXD2AQ5TCZ1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.58■■□□□ 1.68
SH3PXD2AQ5TCZ1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.58■■□□□ 1.68
SH3PXD2AQ5TCZ1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
SH3PXD2AQ5TCZ1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
SH3PXD2AQ5TCZ1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.57■■□□□ 1.68
SH3PXD2AQ5TCZ1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.56■■□□□ 1.68
SH3PXD2AQ5TCZ1 AC091060.1-201ENST00000623524 1766 ntBASIC25.56■■□□□ 1.68
SH3PXD2AQ5TCZ1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SH3PXD2AQ5TCZ1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SH3PXD2AQ5TCZ1 AC092296.2-201ENST00000589470 999 ntBASIC25.56■■□□□ 1.68
SH3PXD2AQ5TCZ1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SH3PXD2AQ5TCZ1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SH3PXD2AQ5TCZ1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SH3PXD2AQ5TCZ1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
SH3PXD2AQ5TCZ1 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SH3PXD2AQ5TCZ1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SH3PXD2AQ5TCZ1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.55■■□□□ 1.68
SH3PXD2AQ5TCZ1 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.55■■□□□ 1.68
SH3PXD2AQ5TCZ1 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SH3PXD2AQ5TCZ1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SH3PXD2AQ5TCZ1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.53■■□□□ 1.68
SH3PXD2AQ5TCZ1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.53■■□□□ 1.68
SH3PXD2AQ5TCZ1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SH3PXD2AQ5TCZ1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
SH3PXD2AQ5TCZ1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SH3PXD2AQ5TCZ1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SH3PXD2AQ5TCZ1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.52■■□□□ 1.68
SH3PXD2AQ5TCZ1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.52■■□□□ 1.68
SH3PXD2AQ5TCZ1 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
SH3PXD2AQ5TCZ1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.52■■□□□ 1.68
SH3PXD2AQ5TCZ1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SH3PXD2AQ5TCZ1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.51■■□□□ 1.67
SH3PXD2AQ5TCZ1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SH3PXD2AQ5TCZ1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
SH3PXD2AQ5TCZ1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.51■■□□□ 1.67
SH3PXD2AQ5TCZ1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SH3PXD2AQ5TCZ1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SH3PXD2AQ5TCZ1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
SH3PXD2AQ5TCZ1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SH3PXD2AQ5TCZ1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SH3PXD2AQ5TCZ1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
SH3PXD2AQ5TCZ1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SH3PXD2AQ5TCZ1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SH3PXD2AQ5TCZ1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SH3PXD2AQ5TCZ1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SH3PXD2AQ5TCZ1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.49■■□□□ 1.67
SH3PXD2AQ5TCZ1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.49■■□□□ 1.67
SH3PXD2AQ5TCZ1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.49■■□□□ 1.67
SH3PXD2AQ5TCZ1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.49■■□□□ 1.67
SH3PXD2AQ5TCZ1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.48■■□□□ 1.67
SH3PXD2AQ5TCZ1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
SH3PXD2AQ5TCZ1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.48■■□□□ 1.67
SH3PXD2AQ5TCZ1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.48■■□□□ 1.67
SH3PXD2AQ5TCZ1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
SH3PXD2AQ5TCZ1 AC092803.2-201ENST00000564287 1899 ntBASIC25.47■■□□□ 1.67
SH3PXD2AQ5TCZ1 AC025884.2-201ENST00000553429 711 ntBASIC25.47■■□□□ 1.67
SH3PXD2AQ5TCZ1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SH3PXD2AQ5TCZ1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.47■■□□□ 1.67
SH3PXD2AQ5TCZ1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SH3PXD2AQ5TCZ1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.47■■□□□ 1.67
SH3PXD2AQ5TCZ1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
SH3PXD2AQ5TCZ1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SH3PXD2AQ5TCZ1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SH3PXD2AQ5TCZ1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.45■■□□□ 1.66
SH3PXD2AQ5TCZ1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SH3PXD2AQ5TCZ1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.45■■□□□ 1.66
SH3PXD2AQ5TCZ1 ECEL1P2-201ENST00000461596 1295 ntBASIC25.45■■□□□ 1.66
SH3PXD2AQ5TCZ1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
SH3PXD2AQ5TCZ1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.45■■□□□ 1.66
SH3PXD2AQ5TCZ1 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.45■■□□□ 1.66
SH3PXD2AQ5TCZ1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SH3PXD2AQ5TCZ1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.44■■□□□ 1.66
SH3PXD2AQ5TCZ1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.44■■□□□ 1.66
SH3PXD2AQ5TCZ1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SH3PXD2AQ5TCZ1 SMPD5-203ENST00000639008 1464 ntBASIC25.44■■□□□ 1.66
SH3PXD2AQ5TCZ1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SH3PXD2AQ5TCZ1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
SH3PXD2AQ5TCZ1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
SH3PXD2AQ5TCZ1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SH3PXD2AQ5TCZ1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.43■■□□□ 1.66
SH3PXD2AQ5TCZ1 ERN1-208ENST00000606895 2068 ntBASIC25.43■■□□□ 1.66
SH3PXD2AQ5TCZ1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SH3PXD2AQ5TCZ1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SH3PXD2AQ5TCZ1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SH3PXD2AQ5TCZ1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.42■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms