Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SNAI3Q3KNW1 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNAI3Q3KNW1 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNAI3Q3KNW1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SNAI3Q3KNW1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNAI3Q3KNW1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.15■□□□□ 0.98
SNAI3Q3KNW1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNAI3Q3KNW1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNAI3Q3KNW1 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNAI3Q3KNW1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SNAI3Q3KNW1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.14■□□□□ 0.97
SNAI3Q3KNW1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.14■□□□□ 0.97
SNAI3Q3KNW1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
SNAI3Q3KNW1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SNAI3Q3KNW1 ERN1-208ENST00000606895 2068 ntBASIC21.13■□□□□ 0.97
SNAI3Q3KNW1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNAI3Q3KNW1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.13■□□□□ 0.97
SNAI3Q3KNW1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNAI3Q3KNW1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNAI3Q3KNW1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNAI3Q3KNW1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.12■□□□□ 0.97
SNAI3Q3KNW1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.12■□□□□ 0.97
SNAI3Q3KNW1 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.12■□□□□ 0.97
SNAI3Q3KNW1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SNAI3Q3KNW1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SNAI3Q3KNW1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNAI3Q3KNW1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.11■□□□□ 0.97
SNAI3Q3KNW1 AC060814.1-201ENST00000554326 538 ntBASIC21.11■□□□□ 0.97
SNAI3Q3KNW1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.11■□□□□ 0.97
SNAI3Q3KNW1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SNAI3Q3KNW1 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNAI3Q3KNW1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SNAI3Q3KNW1 AL157400.5-201ENST00000507624 621 ntBASIC21.1■□□□□ 0.97
SNAI3Q3KNW1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SNAI3Q3KNW1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SNAI3Q3KNW1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNAI3Q3KNW1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNAI3Q3KNW1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SNAI3Q3KNW1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNAI3Q3KNW1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNAI3Q3KNW1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNAI3Q3KNW1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.09■□□□□ 0.97
SNAI3Q3KNW1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNAI3Q3KNW1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SNAI3Q3KNW1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNAI3Q3KNW1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNAI3Q3KNW1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SNAI3Q3KNW1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNAI3Q3KNW1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNAI3Q3KNW1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SNAI3Q3KNW1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.08■□□□□ 0.97
SNAI3Q3KNW1 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SNAI3Q3KNW1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.08■□□□□ 0.97
SNAI3Q3KNW1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SNAI3Q3KNW1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
SNAI3Q3KNW1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNAI3Q3KNW1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SNAI3Q3KNW1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.07■□□□□ 0.96
SNAI3Q3KNW1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNAI3Q3KNW1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SNAI3Q3KNW1 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SNAI3Q3KNW1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.07■□□□□ 0.96
SNAI3Q3KNW1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNAI3Q3KNW1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.07■□□□□ 0.96
SNAI3Q3KNW1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNAI3Q3KNW1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SNAI3Q3KNW1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.07■□□□□ 0.96
SNAI3Q3KNW1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNAI3Q3KNW1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SNAI3Q3KNW1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNAI3Q3KNW1 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNAI3Q3KNW1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNAI3Q3KNW1 MIR4449-201ENST00000578365 66 ntBASIC21.06■□□□□ 0.96
SNAI3Q3KNW1 AC010501.1-201ENST00000606270 1962 ntBASIC21.06■□□□□ 0.96
SNAI3Q3KNW1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNAI3Q3KNW1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.05■□□□□ 0.96
SNAI3Q3KNW1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNAI3Q3KNW1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SNAI3Q3KNW1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNAI3Q3KNW1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNAI3Q3KNW1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.05■□□□□ 0.96
SNAI3Q3KNW1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNAI3Q3KNW1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.04■□□□□ 0.96
SNAI3Q3KNW1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNAI3Q3KNW1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SNAI3Q3KNW1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.04■□□□□ 0.96
SNAI3Q3KNW1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.03■□□□□ 0.96
SNAI3Q3KNW1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SNAI3Q3KNW1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.03■□□□□ 0.96
SNAI3Q3KNW1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SNAI3Q3KNW1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SNAI3Q3KNW1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.03■□□□□ 0.96
SNAI3Q3KNW1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.03■□□□□ 0.96
SNAI3Q3KNW1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SNAI3Q3KNW1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SNAI3Q3KNW1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SNAI3Q3KNW1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SNAI3Q3KNW1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SNAI3Q3KNW1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.02■□□□□ 0.96
SNAI3Q3KNW1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms