Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.11■■□□□ 1.61
COL4A2P08572 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC25.11■■□□□ 1.61
COL4A2P08572 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
COL4A2P08572 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.11■■□□□ 1.61
COL4A2P08572 AC087393.1-201ENST00000582896 145 ntBASIC25.11■■□□□ 1.61
COL4A2P08572 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.1■■□□□ 1.61
COL4A2P08572 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC25.1■■□□□ 1.61
COL4A2P08572 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
COL4A2P08572 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
COL4A2P08572 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
COL4A2P08572 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.1■■□□□ 1.61
COL4A2P08572 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.09■■□□□ 1.61
COL4A2P08572 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL4A2P08572 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.09■■□□□ 1.61
COL4A2P08572 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
COL4A2P08572 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
COL4A2P08572 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
COL4A2P08572 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL4A2P08572 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC25.09■■□□□ 1.61
COL4A2P08572 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
COL4A2P08572 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
COL4A2P08572 AL356441.2-201ENST00000443009 864 ntBASIC25.08■■□□□ 1.61
COL4A2P08572 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
COL4A2P08572 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC25.08■■□□□ 1.61
COL4A2P08572 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
COL4A2P08572 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL4A2P08572 TK2-216ENST00000564917 1156 ntTSL 3 BASIC25.07■■□□□ 1.6
COL4A2P08572 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC25.07■■□□□ 1.6
COL4A2P08572 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC25.07■■□□□ 1.6
COL4A2P08572 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COL4A2P08572 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL4A2P08572 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.07■■□□□ 1.6
COL4A2P08572 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.07■■□□□ 1.6
COL4A2P08572 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.06■■□□□ 1.6
COL4A2P08572 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
COL4A2P08572 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
COL4A2P08572 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
COL4A2P08572 RNF146-205ENST00000477776 762 ntTSL 3 BASIC25.06■■□□□ 1.6
COL4A2P08572 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL4A2P08572 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.05■■□□□ 1.6
COL4A2P08572 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.05■■□□□ 1.6
COL4A2P08572 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC25.05■■□□□ 1.6
COL4A2P08572 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
COL4A2P08572 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC25.04■■□□□ 1.6
COL4A2P08572 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL4A2P08572 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
COL4A2P08572 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL4A2P08572 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.04■■□□□ 1.6
COL4A2P08572 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
COL4A2P08572 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL4A2P08572 Z92544.1-202ENST00000571933 1220 ntBASIC25.03■■□□□ 1.6
COL4A2P08572 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC25.03■■□□□ 1.6
COL4A2P08572 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL4A2P08572 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC25.03■■□□□ 1.6
COL4A2P08572 RPS2P7-201ENST00000447334 885 ntBASIC25.03■■□□□ 1.6
COL4A2P08572 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
COL4A2P08572 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL4A2P08572 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
COL4A2P08572 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC25.01■■□□□ 1.59
COL4A2P08572 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
COL4A2P08572 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
COL4A2P08572 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
COL4A2P08572 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
COL4A2P08572 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
COL4A2P08572 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25■■□□□ 1.59
COL4A2P08572 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25■■□□□ 1.59
COL4A2P08572 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
COL4A2P08572 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
COL4A2P08572 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
COL4A2P08572 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25■■□□□ 1.59
COL4A2P08572 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.99■■□□□ 1.59
COL4A2P08572 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
COL4A2P08572 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.99■■□□□ 1.59
COL4A2P08572 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.99■■□□□ 1.59
COL4A2P08572 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.99■■□□□ 1.59
COL4A2P08572 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.98■■□□□ 1.59
COL4A2P08572 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC24.98■■□□□ 1.59
COL4A2P08572 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
COL4A2P08572 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
COL4A2P08572 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
COL4A2P08572 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
COL4A2P08572 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.96■■□□□ 1.59
COL4A2P08572 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.96■■□□□ 1.59
COL4A2P08572 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.96■■□□□ 1.59
COL4A2P08572 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
COL4A2P08572 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
COL4A2P08572 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
COL4A2P08572 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.59
COL4A2P08572 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
COL4A2P08572 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
COL4A2P08572 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
COL4A2P08572 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.95■■□□□ 1.58
COL4A2P08572 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.95■■□□□ 1.58
COL4A2P08572 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.95■■□□□ 1.58
COL4A2P08572 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
COL4A2P08572 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.94■■□□□ 1.58
COL4A2P08572 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.94■■□□□ 1.58
COL4A2P08572 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
COL4A2P08572 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.94■■□□□ 1.58
COL4A2P08572 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms