Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
PDLIM1O00151 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
PDLIM1O00151 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.27
PDLIM1O00151 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PDLIM1O00151 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDLIM1O00151 AC135983.2-203ENST00000454486 1613 ntBASIC23.01■■□□□ 1.27
PDLIM1O00151 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
PDLIM1O00151 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.01■■□□□ 1.27
PDLIM1O00151 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.01■■□□□ 1.27
PDLIM1O00151 AC021231.2-201ENST00000594613 730 ntBASIC23.01■■□□□ 1.27
PDLIM1O00151 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDLIM1O00151 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PDLIM1O00151 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23■■□□□ 1.27
PDLIM1O00151 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PDLIM1O00151 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23■■□□□ 1.27
PDLIM1O00151 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23■■□□□ 1.27
PDLIM1O00151 DUX4L29-201ENST00000425409 679 ntBASIC23■■□□□ 1.27
PDLIM1O00151 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23■■□□□ 1.27
PDLIM1O00151 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23■■□□□ 1.27
PDLIM1O00151 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23■■□□□ 1.27
PDLIM1O00151 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23■■□□□ 1.27
PDLIM1O00151 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDLIM1O00151 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDLIM1O00151 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDLIM1O00151 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PDLIM1O00151 ABHD17AP4-201ENST00000411545 909 ntBASIC22.98■■□□□ 1.27
PDLIM1O00151 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PDLIM1O00151 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PDLIM1O00151 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDLIM1O00151 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDLIM1O00151 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PDLIM1O00151 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDLIM1O00151 WHAMMP2-203ENST00000563942 1603 ntBASIC22.97■■□□□ 1.27
PDLIM1O00151 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDLIM1O00151 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDLIM1O00151 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PDLIM1O00151 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.96■■□□□ 1.27
PDLIM1O00151 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC22.96■■□□□ 1.27
PDLIM1O00151 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.96■■□□□ 1.27
PDLIM1O00151 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDLIM1O00151 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PDLIM1O00151 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PDLIM1O00151 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PDLIM1O00151 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PDLIM1O00151 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PDLIM1O00151 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
PDLIM1O00151 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.95■■□□□ 1.26
PDLIM1O00151 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDLIM1O00151 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
PDLIM1O00151 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PDLIM1O00151 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PDLIM1O00151 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.93■■□□□ 1.26
PDLIM1O00151 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
PDLIM1O00151 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.93■■□□□ 1.26
PDLIM1O00151 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PDLIM1O00151 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.92■■□□□ 1.26
PDLIM1O00151 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.92■■□□□ 1.26
PDLIM1O00151 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.92■■□□□ 1.26
PDLIM1O00151 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDLIM1O00151 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PDLIM1O00151 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PDLIM1O00151 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
PDLIM1O00151 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.91■■□□□ 1.26
PDLIM1O00151 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.91■■□□□ 1.26
PDLIM1O00151 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDLIM1O00151 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PDLIM1O00151 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PDLIM1O00151 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PDLIM1O00151 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PDLIM1O00151 ZNRF2P2-203ENST00000454624 420 ntBASIC22.89■■□□□ 1.25
PDLIM1O00151 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PDLIM1O00151 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PDLIM1O00151 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PDLIM1O00151 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PDLIM1O00151 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PDLIM1O00151 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.88■■□□□ 1.25
PDLIM1O00151 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
PDLIM1O00151 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
PDLIM1O00151 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
PDLIM1O00151 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC22.88■■□□□ 1.25
PDLIM1O00151 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PDLIM1O00151 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PDLIM1O00151 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PDLIM1O00151 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
PDLIM1O00151 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.87■■□□□ 1.25
PDLIM1O00151 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.87■■□□□ 1.25
PDLIM1O00151 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
PDLIM1O00151 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
PDLIM1O00151 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDLIM1O00151 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.86■■□□□ 1.25
PDLIM1O00151 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PDLIM1O00151 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDLIM1O00151 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.86■■□□□ 1.25
PDLIM1O00151 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDLIM1O00151 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
PDLIM1O00151 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.86■■□□□ 1.25
PDLIM1O00151 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PDLIM1O00151 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDLIM1O00151 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDLIM1O00151 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms