Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 AC008813.1-201ENST00000536597 885 ntBASIC17.07■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 MIR3648-2-201ENST00000581792 180 ntBASIC17.07■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 MIR3648-1-201ENST00000615959 180 ntBASIC17.07■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 CR559946.2-201ENST00000623684 991 ntBASIC17.04■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 AC092803.2-201ENST00000564287 1899 ntBASIC17.02■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.02■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 AC016575.1-201ENST00000607026 382 ntBASIC17.02■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 DUSP8P4-201ENST00000399538 1761 ntBASIC17.02■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.02■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 AC018358.1-201ENST00000631079 1402 ntBASIC17.01■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC17■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 HLA-V-202ENST00000446817 847 ntBASIC16.98■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC16.98■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 MIR639-201ENST00000384974 98 ntBASIC16.97■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms