Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRGV1A0A0A0MS02 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRGV1A0A0A0MS02 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRGV1A0A0A0MS02 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.58■□□□□ 0.4
TRGV1A0A0A0MS02 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRGV1A0A0A0MS02 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRGV1A0A0A0MS02 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
TRGV1A0A0A0MS02 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRGV1A0A0A0MS02 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRGV1A0A0A0MS02 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
TRGV1A0A0A0MS02 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRGV1A0A0A0MS02 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC17.57■□□□□ 0.4
TRGV1A0A0A0MS02 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRGV1A0A0A0MS02 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.57■□□□□ 0.4
TRGV1A0A0A0MS02 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRGV1A0A0A0MS02 AC091060.1-201ENST00000623524 1766 ntBASIC17.57■□□□□ 0.4
TRGV1A0A0A0MS02 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRGV1A0A0A0MS02 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRGV1A0A0A0MS02 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.56■□□□□ 0.4
TRGV1A0A0A0MS02 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRGV1A0A0A0MS02 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.56■□□□□ 0.4
TRGV1A0A0A0MS02 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.56■□□□□ 0.4
TRGV1A0A0A0MS02 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRGV1A0A0A0MS02 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRGV1A0A0A0MS02 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRGV1A0A0A0MS02 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.55■□□□□ 0.4
TRGV1A0A0A0MS02 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.55■□□□□ 0.4
TRGV1A0A0A0MS02 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRGV1A0A0A0MS02 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.55■□□□□ 0.4
TRGV1A0A0A0MS02 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRGV1A0A0A0MS02 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRGV1A0A0A0MS02 AC092803.2-201ENST00000564287 1899 ntBASIC17.54■□□□□ 0.4
TRGV1A0A0A0MS02 SHF-207ENST00000560540 2062 ntTSL 5 BASIC17.54■□□□□ 0.4
TRGV1A0A0A0MS02 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
TRGV1A0A0A0MS02 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.54■□□□□ 0.4
TRGV1A0A0A0MS02 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC17.54■□□□□ 0.4
TRGV1A0A0A0MS02 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.54■□□□□ 0.4
TRGV1A0A0A0MS02 AL359504.2-201ENST00000605506 1601 ntBASIC17.54■□□□□ 0.4
TRGV1A0A0A0MS02 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRGV1A0A0A0MS02 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRGV1A0A0A0MS02 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
TRGV1A0A0A0MS02 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC17.53■□□□□ 0.4
TRGV1A0A0A0MS02 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRGV1A0A0A0MS02 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRGV1A0A0A0MS02 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRGV1A0A0A0MS02 AC145676.1-201ENST00000514988 2004 ntBASIC17.52■□□□□ 0.4
TRGV1A0A0A0MS02 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TRGV1A0A0A0MS02 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17.52■□□□□ 0.39
TRGV1A0A0A0MS02 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC17.52■□□□□ 0.39
TRGV1A0A0A0MS02 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
TRGV1A0A0A0MS02 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRGV1A0A0A0MS02 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRGV1A0A0A0MS02 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRGV1A0A0A0MS02 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRGV1A0A0A0MS02 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRGV1A0A0A0MS02 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC17.51■□□□□ 0.39
TRGV1A0A0A0MS02 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.51■□□□□ 0.39
TRGV1A0A0A0MS02 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC17.51■□□□□ 0.39
TRGV1A0A0A0MS02 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRGV1A0A0A0MS02 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRGV1A0A0A0MS02 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRGV1A0A0A0MS02 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRGV1A0A0A0MS02 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRGV1A0A0A0MS02 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TRGV1A0A0A0MS02 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRGV1A0A0A0MS02 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRGV1A0A0A0MS02 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
TRGV1A0A0A0MS02 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRGV1A0A0A0MS02 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRGV1A0A0A0MS02 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRGV1A0A0A0MS02 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRGV1A0A0A0MS02 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
TRGV1A0A0A0MS02 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRGV1A0A0A0MS02 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRGV1A0A0A0MS02 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRGV1A0A0A0MS02 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRGV1A0A0A0MS02 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRGV1A0A0A0MS02 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC17.48■□□□□ 0.39
TRGV1A0A0A0MS02 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRGV1A0A0A0MS02 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRGV1A0A0A0MS02 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRGV1A0A0A0MS02 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRGV1A0A0A0MS02 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRGV1A0A0A0MS02 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRGV1A0A0A0MS02 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRGV1A0A0A0MS02 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRGV1A0A0A0MS02 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRGV1A0A0A0MS02 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRGV1A0A0A0MS02 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRGV1A0A0A0MS02 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRGV1A0A0A0MS02 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRGV1A0A0A0MS02 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRGV1A0A0A0MS02 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRGV1A0A0A0MS02 CEP120-209ENST00000515110 606 ntTSL 3 BASIC17.46■□□□□ 0.39
TRGV1A0A0A0MS02 AC060814.1-201ENST00000554326 538 ntBASIC17.46■□□□□ 0.39
TRGV1A0A0A0MS02 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRGV1A0A0A0MS02 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRGV1A0A0A0MS02 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC17.46■□□□□ 0.39
TRGV1A0A0A0MS02 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRGV1A0A0A0MS02 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms