Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSSC4Q9Y5U2 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSSC4Q9Y5U2 DUX4L18-201ENST00000553347 1267 ntBASIC19.13■□□□□ 0.65
TSSC4Q9Y5U2 RAP2CP1-202ENST00000605179 643 ntBASIC19.13■□□□□ 0.65
TSSC4Q9Y5U2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.13■□□□□ 0.65
TSSC4Q9Y5U2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.13■□□□□ 0.65
TSSC4Q9Y5U2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TSSC4Q9Y5U2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
TSSC4Q9Y5U2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSSC4Q9Y5U2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TSSC4Q9Y5U2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSSC4Q9Y5U2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TSSC4Q9Y5U2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TSSC4Q9Y5U2 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.12■□□□□ 0.65
TSSC4Q9Y5U2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TSSC4Q9Y5U2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TSSC4Q9Y5U2 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TSSC4Q9Y5U2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TSSC4Q9Y5U2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TSSC4Q9Y5U2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TSSC4Q9Y5U2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TSSC4Q9Y5U2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TSSC4Q9Y5U2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TSSC4Q9Y5U2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TSSC4Q9Y5U2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
TSSC4Q9Y5U2 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TSSC4Q9Y5U2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
TSSC4Q9Y5U2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TSSC4Q9Y5U2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
TSSC4Q9Y5U2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TSSC4Q9Y5U2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.1■□□□□ 0.65
TSSC4Q9Y5U2 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TSSC4Q9Y5U2 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TSSC4Q9Y5U2 AL359504.2-201ENST00000605506 1601 ntBASIC19.1■□□□□ 0.65
TSSC4Q9Y5U2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TSSC4Q9Y5U2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TSSC4Q9Y5U2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
TSSC4Q9Y5U2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.09■□□□□ 0.65
TSSC4Q9Y5U2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.09■□□□□ 0.65
TSSC4Q9Y5U2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TSSC4Q9Y5U2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TSSC4Q9Y5U2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
TSSC4Q9Y5U2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TSSC4Q9Y5U2 DUX4L9-201ENST00000449051 1259 ntBASIC19.08■□□□□ 0.64
TSSC4Q9Y5U2 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TSSC4Q9Y5U2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TSSC4Q9Y5U2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TSSC4Q9Y5U2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.08■□□□□ 0.64
TSSC4Q9Y5U2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TSSC4Q9Y5U2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TSSC4Q9Y5U2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TSSC4Q9Y5U2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TSSC4Q9Y5U2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.07■□□□□ 0.64
TSSC4Q9Y5U2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.06■□□□□ 0.64
TSSC4Q9Y5U2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.06■□□□□ 0.64
TSSC4Q9Y5U2 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TSSC4Q9Y5U2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.06■□□□□ 0.64
TSSC4Q9Y5U2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.06■□□□□ 0.64
TSSC4Q9Y5U2 AC018755.3-202ENST00000596210 929 ntBASIC19.06■□□□□ 0.64
TSSC4Q9Y5U2 BHLHE23-202ENST00000612929 1109 ntBASIC19.06■□□□□ 0.64
TSSC4Q9Y5U2 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TSSC4Q9Y5U2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TSSC4Q9Y5U2 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TSSC4Q9Y5U2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSSC4Q9Y5U2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TSSC4Q9Y5U2 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSSC4Q9Y5U2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TSSC4Q9Y5U2 RARRES2P1-201ENST00000474487 481 ntBASIC19.04■□□□□ 0.64
TSSC4Q9Y5U2 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.04■□□□□ 0.64
TSSC4Q9Y5U2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSSC4Q9Y5U2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TSSC4Q9Y5U2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.04■□□□□ 0.64
TSSC4Q9Y5U2 MIR6765-201ENST00000614092 87 ntBASIC19.04■□□□□ 0.64
TSSC4Q9Y5U2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TSSC4Q9Y5U2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSSC4Q9Y5U2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.03■□□□□ 0.64
TSSC4Q9Y5U2 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
TSSC4Q9Y5U2 AC139795.1-202ENST00000500444 432 ntBASIC19.03■□□□□ 0.64
TSSC4Q9Y5U2 AC074183.2-201ENST00000623112 922 ntBASIC19.03■□□□□ 0.64
TSSC4Q9Y5U2 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
TSSC4Q9Y5U2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.64
TSSC4Q9Y5U2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.02■□□□□ 0.64
TSSC4Q9Y5U2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TSSC4Q9Y5U2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TSSC4Q9Y5U2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TSSC4Q9Y5U2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TSSC4Q9Y5U2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TSSC4Q9Y5U2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.01■□□□□ 0.63
TSSC4Q9Y5U2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.01■□□□□ 0.63
TSSC4Q9Y5U2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.01■□□□□ 0.63
TSSC4Q9Y5U2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TSSC4Q9Y5U2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TSSC4Q9Y5U2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC19■□□□□ 0.63
TSSC4Q9Y5U2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TSSC4Q9Y5U2 DRD5P2-201ENST00000421395 2012 ntBASIC19■□□□□ 0.63
TSSC4Q9Y5U2 SPCS2P3-201ENST00000500401 656 ntBASIC19■□□□□ 0.63
TSSC4Q9Y5U2 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19■□□□□ 0.63
TSSC4Q9Y5U2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19■□□□□ 0.63
TSSC4Q9Y5U2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
TSSC4Q9Y5U2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms