Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
NCKAP1Q9Y2A7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
NCKAP1Q9Y2A7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
NCKAP1Q9Y2A7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
NCKAP1Q9Y2A7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC24.71■■□□□ 1.55
NCKAP1Q9Y2A7 AC018755.3-202ENST00000596210 929 ntBASIC24.71■■□□□ 1.55
NCKAP1Q9Y2A7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
NCKAP1Q9Y2A7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.7■■□□□ 1.54
NCKAP1Q9Y2A7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
NCKAP1Q9Y2A7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
NCKAP1Q9Y2A7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
NCKAP1Q9Y2A7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
NCKAP1Q9Y2A7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.69■■□□□ 1.54
NCKAP1Q9Y2A7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
NCKAP1Q9Y2A7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
NCKAP1Q9Y2A7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
NCKAP1Q9Y2A7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
NCKAP1Q9Y2A7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.69■■□□□ 1.54
NCKAP1Q9Y2A7 MIR6765-201ENST00000614092 87 ntBASIC24.69■■□□□ 1.54
NCKAP1Q9Y2A7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
NCKAP1Q9Y2A7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
NCKAP1Q9Y2A7 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.68■■□□□ 1.54
NCKAP1Q9Y2A7 AC074183.2-201ENST00000623112 922 ntBASIC24.68■■□□□ 1.54
NCKAP1Q9Y2A7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
NCKAP1Q9Y2A7 AC139795.1-202ENST00000500444 432 ntBASIC24.67■■□□□ 1.54
NCKAP1Q9Y2A7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
NCKAP1Q9Y2A7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
NCKAP1Q9Y2A7 SPCS2P3-201ENST00000500401 656 ntBASIC24.66■■□□□ 1.54
NCKAP1Q9Y2A7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.66■■□□□ 1.54
NCKAP1Q9Y2A7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
NCKAP1Q9Y2A7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
NCKAP1Q9Y2A7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC24.65■■□□□ 1.54
NCKAP1Q9Y2A7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
NCKAP1Q9Y2A7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.65■■□□□ 1.54
NCKAP1Q9Y2A7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.64■■□□□ 1.54
NCKAP1Q9Y2A7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.64■■□□□ 1.53
NCKAP1Q9Y2A7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.64■■□□□ 1.53
NCKAP1Q9Y2A7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
NCKAP1Q9Y2A7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
NCKAP1Q9Y2A7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
NCKAP1Q9Y2A7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
NCKAP1Q9Y2A7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
NCKAP1Q9Y2A7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.63■■□□□ 1.53
NCKAP1Q9Y2A7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.62■■□□□ 1.53
NCKAP1Q9Y2A7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.62■■□□□ 1.53
NCKAP1Q9Y2A7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.62■■□□□ 1.53
NCKAP1Q9Y2A7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NCKAP1Q9Y2A7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
NCKAP1Q9Y2A7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
NCKAP1Q9Y2A7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
NCKAP1Q9Y2A7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.61■■□□□ 1.53
NCKAP1Q9Y2A7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
NCKAP1Q9Y2A7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NCKAP1Q9Y2A7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NCKAP1Q9Y2A7 DRD5P2-201ENST00000421395 2012 ntBASIC24.61■■□□□ 1.53
NCKAP1Q9Y2A7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
NCKAP1Q9Y2A7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NCKAP1Q9Y2A7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.6■■□□□ 1.53
NCKAP1Q9Y2A7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.6■■□□□ 1.53
NCKAP1Q9Y2A7 AC010980.1-201ENST00000587192 1142 ntBASIC24.59■■□□□ 1.53
NCKAP1Q9Y2A7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.59■■□□□ 1.53
NCKAP1Q9Y2A7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.59■■□□□ 1.53
NCKAP1Q9Y2A7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
NCKAP1Q9Y2A7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
NCKAP1Q9Y2A7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
NCKAP1Q9Y2A7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.58■■□□□ 1.53
NCKAP1Q9Y2A7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24.58■■□□□ 1.53
NCKAP1Q9Y2A7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.58■■□□□ 1.53
NCKAP1Q9Y2A7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
NCKAP1Q9Y2A7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
NCKAP1Q9Y2A7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
NCKAP1Q9Y2A7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.57■■□□□ 1.52
NCKAP1Q9Y2A7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
NCKAP1Q9Y2A7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NCKAP1Q9Y2A7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.56■■□□□ 1.52
NCKAP1Q9Y2A7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
NCKAP1Q9Y2A7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.56■■□□□ 1.52
NCKAP1Q9Y2A7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NCKAP1Q9Y2A7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.56■■□□□ 1.52
NCKAP1Q9Y2A7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NCKAP1Q9Y2A7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
NCKAP1Q9Y2A7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
NCKAP1Q9Y2A7 AC139426.1-201ENST00000568218 2529 ntBASIC24.55■■□□□ 1.52
NCKAP1Q9Y2A7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
NCKAP1Q9Y2A7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.55■■□□□ 1.52
NCKAP1Q9Y2A7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NCKAP1Q9Y2A7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NCKAP1Q9Y2A7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
NCKAP1Q9Y2A7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
NCKAP1Q9Y2A7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NCKAP1Q9Y2A7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.53■■□□□ 1.52
NCKAP1Q9Y2A7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.53■■□□□ 1.52
NCKAP1Q9Y2A7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
NCKAP1Q9Y2A7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
NCKAP1Q9Y2A7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
NCKAP1Q9Y2A7 YBX1P4-201ENST00000392794 808 ntBASIC24.52■■□□□ 1.52
NCKAP1Q9Y2A7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.52■■□□□ 1.52
NCKAP1Q9Y2A7 KRT8P33-201ENST00000508125 1423 ntBASIC24.52■■□□□ 1.52
NCKAP1Q9Y2A7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
NCKAP1Q9Y2A7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.51■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms