Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC42SE2Q9NRR3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDC42SE2Q9NRR3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC42SE2Q9NRR3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC16.84■□□□□ 0.29
CDC42SE2Q9NRR3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC16.84■□□□□ 0.29
CDC42SE2Q9NRR3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC42SE2Q9NRR3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDC42SE2Q9NRR3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CDC42SE2Q9NRR3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC42SE2Q9NRR3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDC42SE2Q9NRR3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC42SE2Q9NRR3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDC42SE2Q9NRR3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDC42SE2Q9NRR3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC16.83■□□□□ 0.28
CDC42SE2Q9NRR3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDC42SE2Q9NRR3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC16.83■□□□□ 0.28
CDC42SE2Q9NRR3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC16.83■□□□□ 0.28
CDC42SE2Q9NRR3 AC021231.2-201ENST00000594613 730 ntBASIC16.83■□□□□ 0.28
CDC42SE2Q9NRR3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDC42SE2Q9NRR3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC16.83■□□□□ 0.28
CDC42SE2Q9NRR3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CDC42SE2Q9NRR3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC16.82■□□□□ 0.28
CDC42SE2Q9NRR3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDC42SE2Q9NRR3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CDC42SE2Q9NRR3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDC42SE2Q9NRR3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC42SE2Q9NRR3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CDC42SE2Q9NRR3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDC42SE2Q9NRR3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC16.82■□□□□ 0.28
CDC42SE2Q9NRR3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDC42SE2Q9NRR3 AC010501.1-201ENST00000606270 1962 ntBASIC16.82■□□□□ 0.28
CDC42SE2Q9NRR3 DUX4L29-201ENST00000425409 679 ntBASIC16.81■□□□□ 0.28
CDC42SE2Q9NRR3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC16.81■□□□□ 0.28
CDC42SE2Q9NRR3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CDC42SE2Q9NRR3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC42SE2Q9NRR3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC42SE2Q9NRR3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC42SE2Q9NRR3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC42SE2Q9NRR3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC16.8■□□□□ 0.28
CDC42SE2Q9NRR3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDC42SE2Q9NRR3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDC42SE2Q9NRR3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
CDC42SE2Q9NRR3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDC42SE2Q9NRR3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC16.79■□□□□ 0.28
CDC42SE2Q9NRR3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDC42SE2Q9NRR3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDC42SE2Q9NRR3 ERN1-208ENST00000606895 2068 ntBASIC16.79■□□□□ 0.28
CDC42SE2Q9NRR3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC16.79■□□□□ 0.28
CDC42SE2Q9NRR3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDC42SE2Q9NRR3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDC42SE2Q9NRR3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDC42SE2Q9NRR3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC16.78■□□□□ 0.28
CDC42SE2Q9NRR3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDC42SE2Q9NRR3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDC42SE2Q9NRR3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDC42SE2Q9NRR3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC16.77■□□□□ 0.28
CDC42SE2Q9NRR3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDC42SE2Q9NRR3 AC093323.1-202ENST00000635031 2045 ntBASIC16.77■□□□□ 0.27
CDC42SE2Q9NRR3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
CDC42SE2Q9NRR3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDC42SE2Q9NRR3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CDC42SE2Q9NRR3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC42SE2Q9NRR3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.76■□□□□ 0.27
CDC42SE2Q9NRR3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDC42SE2Q9NRR3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC42SE2Q9NRR3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDC42SE2Q9NRR3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC16.75■□□□□ 0.27
CDC42SE2Q9NRR3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC16.75■□□□□ 0.27
CDC42SE2Q9NRR3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC16.75■□□□□ 0.27
CDC42SE2Q9NRR3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC42SE2Q9NRR3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC16.75■□□□□ 0.27
CDC42SE2Q9NRR3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDC42SE2Q9NRR3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC16.75■□□□□ 0.27
CDC42SE2Q9NRR3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42SE2Q9NRR3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42SE2Q9NRR3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42SE2Q9NRR3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42SE2Q9NRR3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42SE2Q9NRR3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CDC42SE2Q9NRR3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42SE2Q9NRR3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CDC42SE2Q9NRR3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42SE2Q9NRR3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42SE2Q9NRR3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CDC42SE2Q9NRR3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42SE2Q9NRR3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CDC42SE2Q9NRR3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42SE2Q9NRR3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42SE2Q9NRR3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CDC42SE2Q9NRR3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42SE2Q9NRR3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC16.72■□□□□ 0.27
CDC42SE2Q9NRR3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC16.72■□□□□ 0.27
CDC42SE2Q9NRR3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42SE2Q9NRR3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42SE2Q9NRR3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDC42SE2Q9NRR3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDC42SE2Q9NRR3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDC42SE2Q9NRR3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDC42SE2Q9NRR3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CDC42SE2Q9NRR3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms