Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
MAP1LC3AQ9H492 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MAP1LC3AQ9H492 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MAP1LC3AQ9H492 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MAP1LC3AQ9H492 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.8■□□□□ 0.44
MAP1LC3AQ9H492 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MAP1LC3AQ9H492 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MAP1LC3AQ9H492 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MAP1LC3AQ9H492 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MAP1LC3AQ9H492 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
MAP1LC3AQ9H492 AP002365.1-201ENST00000603448 772 ntBASIC17.79■□□□□ 0.44
MAP1LC3AQ9H492 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
MAP1LC3AQ9H492 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
MAP1LC3AQ9H492 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC17.79■□□□□ 0.44
MAP1LC3AQ9H492 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
MAP1LC3AQ9H492 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
MAP1LC3AQ9H492 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
MAP1LC3AQ9H492 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC17.78■□□□□ 0.44
MAP1LC3AQ9H492 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
MAP1LC3AQ9H492 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
MAP1LC3AQ9H492 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.78■□□□□ 0.44
MAP1LC3AQ9H492 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC17.78■□□□□ 0.44
MAP1LC3AQ9H492 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC17.78■□□□□ 0.44
MAP1LC3AQ9H492 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MAP1LC3AQ9H492 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
MAP1LC3AQ9H492 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MAP1LC3AQ9H492 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
MAP1LC3AQ9H492 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MAP1LC3AQ9H492 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
MAP1LC3AQ9H492 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MAP1LC3AQ9H492 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
MAP1LC3AQ9H492 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
MAP1LC3AQ9H492 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MAP1LC3AQ9H492 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
MAP1LC3AQ9H492 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
MAP1LC3AQ9H492 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MAP1LC3AQ9H492 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MAP1LC3AQ9H492 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MAP1LC3AQ9H492 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MAP1LC3AQ9H492 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC17.75■□□□□ 0.43
MAP1LC3AQ9H492 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.75■□□□□ 0.43
MAP1LC3AQ9H492 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MAP1LC3AQ9H492 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
MAP1LC3AQ9H492 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MAP1LC3AQ9H492 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MAP1LC3AQ9H492 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
MAP1LC3AQ9H492 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MAP1LC3AQ9H492 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MAP1LC3AQ9H492 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.74■□□□□ 0.43
MAP1LC3AQ9H492 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
MAP1LC3AQ9H492 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MAP1LC3AQ9H492 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MAP1LC3AQ9H492 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MAP1LC3AQ9H492 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MAP1LC3AQ9H492 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
MAP1LC3AQ9H492 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MAP1LC3AQ9H492 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
MAP1LC3AQ9H492 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MAP1LC3AQ9H492 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MAP1LC3AQ9H492 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
MAP1LC3AQ9H492 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MAP1LC3AQ9H492 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC17.71■□□□□ 0.43
MAP1LC3AQ9H492 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MAP1LC3AQ9H492 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
MAP1LC3AQ9H492 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MAP1LC3AQ9H492 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MAP1LC3AQ9H492 AC142472.1-201ENST00000612013 1741 ntBASIC17.71■□□□□ 0.43
MAP1LC3AQ9H492 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
MAP1LC3AQ9H492 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MAP1LC3AQ9H492 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
MAP1LC3AQ9H492 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
MAP1LC3AQ9H492 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
MAP1LC3AQ9H492 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MAP1LC3AQ9H492 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MAP1LC3AQ9H492 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
MAP1LC3AQ9H492 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
MAP1LC3AQ9H492 MED17-227ENST00000640521 2047 ntTSL 5 BASIC17.7■□□□□ 0.42
MAP1LC3AQ9H492 TMEM202-AS1-202ENST00000565181 2325 ntBASIC17.7■□□□□ 0.42
MAP1LC3AQ9H492 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MAP1LC3AQ9H492 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MAP1LC3AQ9H492 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.69■□□□□ 0.42
MAP1LC3AQ9H492 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.69■□□□□ 0.42
MAP1LC3AQ9H492 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.69■□□□□ 0.42
MAP1LC3AQ9H492 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MAP1LC3AQ9H492 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MAP1LC3AQ9H492 AL139125.2-201ENST00000623134 1869 ntBASIC17.69■□□□□ 0.42
MAP1LC3AQ9H492 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
MAP1LC3AQ9H492 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MAP1LC3AQ9H492 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MAP1LC3AQ9H492 DENR-202ENST00000455982 1052 ntTSL 5 BASIC17.68■□□□□ 0.42
MAP1LC3AQ9H492 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MAP1LC3AQ9H492 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MAP1LC3AQ9H492 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MAP1LC3AQ9H492 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MAP1LC3AQ9H492 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MAP1LC3AQ9H492 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
MAP1LC3AQ9H492 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MAP1LC3AQ9H492 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.67■□□□□ 0.42
MAP1LC3AQ9H492 AC135983.2-203ENST00000454486 1613 ntBASIC17.67■□□□□ 0.42
MAP1LC3AQ9H492 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms