Protein–RNA interactions for Protein: Q9H3R1

NDST4, Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDST4Q9H3R1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
NDST4Q9H3R1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
NDST4Q9H3R1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
NDST4Q9H3R1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
NDST4Q9H3R1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
NDST4Q9H3R1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
NDST4Q9H3R1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
NDST4Q9H3R1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
NDST4Q9H3R1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
NDST4Q9H3R1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
NDST4Q9H3R1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
NDST4Q9H3R1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
NDST4Q9H3R1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.76■■□□□ 1.87
NDST4Q9H3R1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
NDST4Q9H3R1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
NDST4Q9H3R1 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.75■■□□□ 1.87
NDST4Q9H3R1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
NDST4Q9H3R1 HLA-V-202ENST00000446817 847 ntBASIC26.75■■□□□ 1.87
NDST4Q9H3R1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
NDST4Q9H3R1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
NDST4Q9H3R1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.75■■□□□ 1.87
NDST4Q9H3R1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.74■■□□□ 1.87
NDST4Q9H3R1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.74■■□□□ 1.87
NDST4Q9H3R1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.74■■□□□ 1.87
NDST4Q9H3R1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.74■■□□□ 1.87
NDST4Q9H3R1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
NDST4Q9H3R1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
NDST4Q9H3R1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.73■■□□□ 1.87
NDST4Q9H3R1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.73■■□□□ 1.87
NDST4Q9H3R1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
NDST4Q9H3R1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
NDST4Q9H3R1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
NDST4Q9H3R1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
NDST4Q9H3R1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.72■■□□□ 1.87
NDST4Q9H3R1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
NDST4Q9H3R1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.72■■□□□ 1.87
NDST4Q9H3R1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.72■■□□□ 1.87
NDST4Q9H3R1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.72■■□□□ 1.87
NDST4Q9H3R1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.72■■□□□ 1.87
NDST4Q9H3R1 AC020928.2-201ENST00000588717 2197 ntBASIC26.71■■□□□ 1.87
NDST4Q9H3R1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
NDST4Q9H3R1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
NDST4Q9H3R1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
NDST4Q9H3R1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
NDST4Q9H3R1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.7■■□□□ 1.87
NDST4Q9H3R1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.7■■□□□ 1.87
NDST4Q9H3R1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
NDST4Q9H3R1 ABHD17AP4-201ENST00000411545 909 ntBASIC26.7■■□□□ 1.86
NDST4Q9H3R1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.7■■□□□ 1.86
NDST4Q9H3R1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
NDST4Q9H3R1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
NDST4Q9H3R1 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
NDST4Q9H3R1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
NDST4Q9H3R1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
NDST4Q9H3R1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
NDST4Q9H3R1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
NDST4Q9H3R1 CR559946.2-201ENST00000623684 991 ntBASIC26.69■■□□□ 1.86
NDST4Q9H3R1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
NDST4Q9H3R1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.69■■□□□ 1.86
NDST4Q9H3R1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
NDST4Q9H3R1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.68■■□□□ 1.86
NDST4Q9H3R1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
NDST4Q9H3R1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
NDST4Q9H3R1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
NDST4Q9H3R1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
NDST4Q9H3R1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
NDST4Q9H3R1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
NDST4Q9H3R1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
NDST4Q9H3R1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.67■■□□□ 1.86
NDST4Q9H3R1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
NDST4Q9H3R1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
NDST4Q9H3R1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
NDST4Q9H3R1 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.65■■□□□ 1.86
NDST4Q9H3R1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NDST4Q9H3R1 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NDST4Q9H3R1 AL359258.2-201ENST00000564063 1566 ntBASIC26.65■■□□□ 1.86
NDST4Q9H3R1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.65■■□□□ 1.86
NDST4Q9H3R1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NDST4Q9H3R1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
NDST4Q9H3R1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.64■■□□□ 1.86
NDST4Q9H3R1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.85
NDST4Q9H3R1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.64■■□□□ 1.85
NDST4Q9H3R1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.64■■□□□ 1.85
NDST4Q9H3R1 ERN1-208ENST00000606895 2068 ntBASIC26.64■■□□□ 1.85
NDST4Q9H3R1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.63■■□□□ 1.85
NDST4Q9H3R1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
NDST4Q9H3R1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
NDST4Q9H3R1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
NDST4Q9H3R1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
NDST4Q9H3R1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.62■■□□□ 1.85
NDST4Q9H3R1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
NDST4Q9H3R1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
NDST4Q9H3R1 AC135731.1-201ENST00000569415 2548 ntBASIC26.62■■□□□ 1.85
NDST4Q9H3R1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
NDST4Q9H3R1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.61■■□□□ 1.85
NDST4Q9H3R1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
NDST4Q9H3R1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
NDST4Q9H3R1 MIR3648-2-201ENST00000581792 180 ntBASIC26.6■■□□□ 1.85
NDST4Q9H3R1 MIR3648-1-201ENST00000615959 180 ntBASIC26.6■■□□□ 1.85
NDST4Q9H3R1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.6■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms