Protein–RNA interactions for Protein: Q9H2W1

MS4A6A, Membrane-spanning 4-domains subfamily A member 6A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6AQ9H2W1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MS4A6AQ9H2W1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
MS4A6AQ9H2W1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
MS4A6AQ9H2W1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
MS4A6AQ9H2W1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
MS4A6AQ9H2W1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MS4A6AQ9H2W1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MS4A6AQ9H2W1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MS4A6AQ9H2W1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MS4A6AQ9H2W1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MS4A6AQ9H2W1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MS4A6AQ9H2W1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MS4A6AQ9H2W1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
MS4A6AQ9H2W1 MIR639-201ENST00000384974 98 ntBASIC18.73■□□□□ 0.59
MS4A6AQ9H2W1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MS4A6AQ9H2W1 WHAMMP3-201ENST00000611636 1609 ntBASIC18.73■□□□□ 0.59
MS4A6AQ9H2W1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
MS4A6AQ9H2W1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
MS4A6AQ9H2W1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
MS4A6AQ9H2W1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
MS4A6AQ9H2W1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.72■□□□□ 0.59
MS4A6AQ9H2W1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MS4A6AQ9H2W1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.72■□□□□ 0.59
MS4A6AQ9H2W1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.72■□□□□ 0.59
MS4A6AQ9H2W1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.72■□□□□ 0.59
MS4A6AQ9H2W1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MS4A6AQ9H2W1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MS4A6AQ9H2W1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
MS4A6AQ9H2W1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC18.72■□□□□ 0.59
MS4A6AQ9H2W1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MS4A6AQ9H2W1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MS4A6AQ9H2W1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
MS4A6AQ9H2W1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MS4A6AQ9H2W1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
MS4A6AQ9H2W1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MS4A6AQ9H2W1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MS4A6AQ9H2W1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MS4A6AQ9H2W1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
MS4A6AQ9H2W1 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MS4A6AQ9H2W1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MS4A6AQ9H2W1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MS4A6AQ9H2W1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MS4A6AQ9H2W1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
MS4A6AQ9H2W1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC18.7■□□□□ 0.58
MS4A6AQ9H2W1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
MS4A6AQ9H2W1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MS4A6AQ9H2W1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MS4A6AQ9H2W1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.69■□□□□ 0.58
MS4A6AQ9H2W1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.69■□□□□ 0.58
MS4A6AQ9H2W1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.69■□□□□ 0.58
MS4A6AQ9H2W1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
MS4A6AQ9H2W1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MS4A6AQ9H2W1 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.68■□□□□ 0.58
MS4A6AQ9H2W1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MS4A6AQ9H2W1 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MS4A6AQ9H2W1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.67■□□□□ 0.58
MS4A6AQ9H2W1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MS4A6AQ9H2W1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.67■□□□□ 0.58
MS4A6AQ9H2W1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MS4A6AQ9H2W1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
MS4A6AQ9H2W1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MS4A6AQ9H2W1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MS4A6AQ9H2W1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC18.66■□□□□ 0.58
MS4A6AQ9H2W1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
MS4A6AQ9H2W1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.66■□□□□ 0.58
MS4A6AQ9H2W1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
MS4A6AQ9H2W1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MS4A6AQ9H2W1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
MS4A6AQ9H2W1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MS4A6AQ9H2W1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC18.66■□□□□ 0.58
MS4A6AQ9H2W1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.66■□□□□ 0.58
MS4A6AQ9H2W1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.66■□□□□ 0.58
MS4A6AQ9H2W1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.66■□□□□ 0.58
MS4A6AQ9H2W1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MS4A6AQ9H2W1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MS4A6AQ9H2W1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MS4A6AQ9H2W1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MS4A6AQ9H2W1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MS4A6AQ9H2W1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MS4A6AQ9H2W1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
MS4A6AQ9H2W1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MS4A6AQ9H2W1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MS4A6AQ9H2W1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
MS4A6AQ9H2W1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MS4A6AQ9H2W1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
MS4A6AQ9H2W1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
MS4A6AQ9H2W1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
MS4A6AQ9H2W1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MS4A6AQ9H2W1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MS4A6AQ9H2W1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MS4A6AQ9H2W1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MS4A6AQ9H2W1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MS4A6AQ9H2W1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MS4A6AQ9H2W1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MS4A6AQ9H2W1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MS4A6AQ9H2W1 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MS4A6AQ9H2W1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
MS4A6AQ9H2W1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MS4A6AQ9H2W1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
MS4A6AQ9H2W1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms