Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CSMD1Q96PZ7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.23■□□□□ 0.99
CSMD1Q96PZ7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSMD1Q96PZ7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.22■□□□□ 0.99
CSMD1Q96PZ7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CSMD1Q96PZ7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CSMD1Q96PZ7 AC026271.2-201ENST00000428091 497 ntBASIC21.21■□□□□ 0.99
CSMD1Q96PZ7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.21■□□□□ 0.99
CSMD1Q96PZ7 AC131281.2-201ENST00000520478 145 ntBASIC21.21■□□□□ 0.99
CSMD1Q96PZ7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CSMD1Q96PZ7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CSMD1Q96PZ7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CSMD1Q96PZ7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSMD1Q96PZ7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CSMD1Q96PZ7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.2■□□□□ 0.98
CSMD1Q96PZ7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSMD1Q96PZ7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.2■□□□□ 0.98
CSMD1Q96PZ7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.2■□□□□ 0.98
CSMD1Q96PZ7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSMD1Q96PZ7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CSMD1Q96PZ7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.19■□□□□ 0.98
CSMD1Q96PZ7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CSMD1Q96PZ7 MIR4787-201ENST00000607364 84 ntBASIC21.19■□□□□ 0.98
CSMD1Q96PZ7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.19■□□□□ 0.98
CSMD1Q96PZ7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSMD1Q96PZ7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSMD1Q96PZ7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSMD1Q96PZ7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSMD1Q96PZ7 ZNRF2P3-201ENST00000424200 374 ntBASIC21.19■□□□□ 0.98
CSMD1Q96PZ7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.19■□□□□ 0.98
CSMD1Q96PZ7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSMD1Q96PZ7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSMD1Q96PZ7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CSMD1Q96PZ7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.18■□□□□ 0.98
CSMD1Q96PZ7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSMD1Q96PZ7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.18■□□□□ 0.98
CSMD1Q96PZ7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSMD1Q96PZ7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.18■□□□□ 0.98
CSMD1Q96PZ7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CSMD1Q96PZ7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.18■□□□□ 0.98
CSMD1Q96PZ7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSMD1Q96PZ7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSMD1Q96PZ7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.18■□□□□ 0.98
CSMD1Q96PZ7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.18■□□□□ 0.98
CSMD1Q96PZ7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.17■□□□□ 0.98
CSMD1Q96PZ7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.17■□□□□ 0.98
CSMD1Q96PZ7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.17■□□□□ 0.98
CSMD1Q96PZ7 AC110285.6-201ENST00000617652 491 ntBASIC21.17■□□□□ 0.98
CSMD1Q96PZ7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSMD1Q96PZ7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.17■□□□□ 0.98
CSMD1Q96PZ7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSMD1Q96PZ7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSMD1Q96PZ7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CSMD1Q96PZ7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.17■□□□□ 0.98
CSMD1Q96PZ7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CSMD1Q96PZ7 AC139426.1-201ENST00000568218 2529 ntBASIC21.16■□□□□ 0.98
CSMD1Q96PZ7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.16■□□□□ 0.98
CSMD1Q96PZ7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CSMD1Q96PZ7 ABCB10P1-201ENST00000614297 2181 ntBASIC21.16■□□□□ 0.98
CSMD1Q96PZ7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CSMD1Q96PZ7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CSMD1Q96PZ7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.16■□□□□ 0.98
CSMD1Q96PZ7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CSMD1Q96PZ7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CSMD1Q96PZ7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSMD1Q96PZ7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSMD1Q96PZ7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSMD1Q96PZ7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.15■□□□□ 0.98
CSMD1Q96PZ7 AC018755.3-202ENST00000596210 929 ntBASIC21.15■□□□□ 0.98
CSMD1Q96PZ7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CSMD1Q96PZ7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CSMD1Q96PZ7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CSMD1Q96PZ7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CSMD1Q96PZ7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.14■□□□□ 0.98
CSMD1Q96PZ7 AC104564.3-201ENST00000582367 638 ntBASIC21.13■□□□□ 0.97
CSMD1Q96PZ7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CSMD1Q96PZ7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CSMD1Q96PZ7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.13■□□□□ 0.97
CSMD1Q96PZ7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.13■□□□□ 0.97
CSMD1Q96PZ7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CSMD1Q96PZ7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CSMD1Q96PZ7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.13■□□□□ 0.97
CSMD1Q96PZ7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CSMD1Q96PZ7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CSMD1Q96PZ7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CSMD1Q96PZ7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CSMD1Q96PZ7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSMD1Q96PZ7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSMD1Q96PZ7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.12■□□□□ 0.97
CSMD1Q96PZ7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CSMD1Q96PZ7 LONRF2P2-201ENST00000439212 571 ntBASIC21.12■□□□□ 0.97
CSMD1Q96PZ7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.12■□□□□ 0.97
CSMD1Q96PZ7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.12■□□□□ 0.97
CSMD1Q96PZ7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSMD1Q96PZ7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.11■□□□□ 0.97
CSMD1Q96PZ7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CSMD1Q96PZ7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSMD1Q96PZ7 KRT125P-201ENST00000546827 989 ntBASIC21.1■□□□□ 0.97
CSMD1Q96PZ7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSMD1Q96PZ7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 161.5 ms