Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
SMARCC2Q8TAQ2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.84■■■□□ 2.21
SMARCC2Q8TAQ2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC28.84■■■□□ 2.21
SMARCC2Q8TAQ2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
SMARCC2Q8TAQ2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
SMARCC2Q8TAQ2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC28.83■■■□□ 2.21
SMARCC2Q8TAQ2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC28.83■■■□□ 2.21
SMARCC2Q8TAQ2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
SMARCC2Q8TAQ2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SMARCC2Q8TAQ2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SMARCC2Q8TAQ2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
SMARCC2Q8TAQ2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC28.83■■■□□ 2.2
SMARCC2Q8TAQ2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
SMARCC2Q8TAQ2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
SMARCC2Q8TAQ2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC28.81■■■□□ 2.2
SMARCC2Q8TAQ2 GPX1-201ENST00000419349 1106 ntBASIC28.81■■■□□ 2.2
SMARCC2Q8TAQ2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC28.81■■■□□ 2.2
SMARCC2Q8TAQ2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
SMARCC2Q8TAQ2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SMARCC2Q8TAQ2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
SMARCC2Q8TAQ2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC28.79■■■□□ 2.2
SMARCC2Q8TAQ2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
SMARCC2Q8TAQ2 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
SMARCC2Q8TAQ2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC28.79■■■□□ 2.2
SMARCC2Q8TAQ2 AC022413.1-201ENST00000624602 984 ntBASIC28.79■■■□□ 2.2
SMARCC2Q8TAQ2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
SMARCC2Q8TAQ2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC28.79■■■□□ 2.2
SMARCC2Q8TAQ2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC28.79■■■□□ 2.2
SMARCC2Q8TAQ2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC28.78■■■□□ 2.2
SMARCC2Q8TAQ2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
SMARCC2Q8TAQ2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
SMARCC2Q8TAQ2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC28.77■■■□□ 2.2
SMARCC2Q8TAQ2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
SMARCC2Q8TAQ2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
SMARCC2Q8TAQ2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
SMARCC2Q8TAQ2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC28.77■■■□□ 2.2
SMARCC2Q8TAQ2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
SMARCC2Q8TAQ2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC28.77■■■□□ 2.2
SMARCC2Q8TAQ2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC28.77■■■□□ 2.2
SMARCC2Q8TAQ2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC28.77■■■□□ 2.2
SMARCC2Q8TAQ2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC28.76■■■□□ 2.2
SMARCC2Q8TAQ2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC28.76■■■□□ 2.19
SMARCC2Q8TAQ2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
SMARCC2Q8TAQ2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
SMARCC2Q8TAQ2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
SMARCC2Q8TAQ2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC28.75■■■□□ 2.19
SMARCC2Q8TAQ2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.75■■■□□ 2.19
SMARCC2Q8TAQ2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
SMARCC2Q8TAQ2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC28.74■■■□□ 2.19
SMARCC2Q8TAQ2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28.74■■■□□ 2.19
SMARCC2Q8TAQ2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
SMARCC2Q8TAQ2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28.73■■■□□ 2.19
SMARCC2Q8TAQ2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.73■■■□□ 2.19
SMARCC2Q8TAQ2 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC28.73■■■□□ 2.19
SMARCC2Q8TAQ2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SMARCC2Q8TAQ2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC28.72■■■□□ 2.19
SMARCC2Q8TAQ2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SMARCC2Q8TAQ2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
SMARCC2Q8TAQ2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC28.72■■■□□ 2.19
SMARCC2Q8TAQ2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC28.71■■■□□ 2.19
SMARCC2Q8TAQ2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
SMARCC2Q8TAQ2 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
SMARCC2Q8TAQ2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC28.7■■■□□ 2.18
SMARCC2Q8TAQ2 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC28.7■■■□□ 2.18
SMARCC2Q8TAQ2 AC145676.1-201ENST00000514988 2004 ntBASIC28.7■■■□□ 2.18
SMARCC2Q8TAQ2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
SMARCC2Q8TAQ2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
SMARCC2Q8TAQ2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SMARCC2Q8TAQ2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC28.69■■■□□ 2.18
SMARCC2Q8TAQ2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC28.68■■■□□ 2.18
SMARCC2Q8TAQ2 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC28.68■■■□□ 2.18
SMARCC2Q8TAQ2 AC126177.7-201ENST00000547904 679 ntBASIC28.68■■■□□ 2.18
SMARCC2Q8TAQ2 AC060814.1-201ENST00000554326 538 ntBASIC28.68■■■□□ 2.18
SMARCC2Q8TAQ2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SMARCC2Q8TAQ2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
SMARCC2Q8TAQ2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SMARCC2Q8TAQ2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SMARCC2Q8TAQ2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC28.67■■■□□ 2.18
SMARCC2Q8TAQ2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC28.67■■■□□ 2.18
SMARCC2Q8TAQ2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SMARCC2Q8TAQ2 MED25-210ENST00000612854 801 ntTSL 5 BASIC28.67■■■□□ 2.18
SMARCC2Q8TAQ2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SMARCC2Q8TAQ2 MED25-214ENST00000622402 642 ntTSL 5 BASIC28.67■■■□□ 2.18
SMARCC2Q8TAQ2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SMARCC2Q8TAQ2 AC092803.2-201ENST00000564287 1899 ntBASIC28.67■■■□□ 2.18
SMARCC2Q8TAQ2 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC28.66■■■□□ 2.18
SMARCC2Q8TAQ2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SMARCC2Q8TAQ2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SMARCC2Q8TAQ2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SMARCC2Q8TAQ2 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCC2Q8TAQ2 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCC2Q8TAQ2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
SMARCC2Q8TAQ2 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCC2Q8TAQ2 RNF126P1-201ENST00000567452 1320 ntBASIC28.65■■■□□ 2.18
SMARCC2Q8TAQ2 DUSP8P4-201ENST00000399538 1761 ntBASIC28.65■■■□□ 2.18
SMARCC2Q8TAQ2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SMARCC2Q8TAQ2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
SMARCC2Q8TAQ2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
SMARCC2Q8TAQ2 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
SMARCC2Q8TAQ2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms