Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC34.67■■■■□ 3.14
ARHGEF28Q8N1W1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
ARHGEF28Q8N1W1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC34.67■■■■□ 3.14
ARHGEF28Q8N1W1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC34.66■■■■□ 3.14
ARHGEF28Q8N1W1 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC34.66■■■■□ 3.14
ARHGEF28Q8N1W1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC34.65■■■■□ 3.14
ARHGEF28Q8N1W1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC34.65■■■■□ 3.14
ARHGEF28Q8N1W1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC34.64■■■■□ 3.14
ARHGEF28Q8N1W1 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC34.64■■■■□ 3.14
ARHGEF28Q8N1W1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC34.64■■■■□ 3.14
ARHGEF28Q8N1W1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
ARHGEF28Q8N1W1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
ARHGEF28Q8N1W1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC34.63■■■■□ 3.13
ARHGEF28Q8N1W1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC34.63■■■■□ 3.13
ARHGEF28Q8N1W1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC34.63■■■■□ 3.13
ARHGEF28Q8N1W1 MIR6765-201ENST00000614092 87 ntBASIC34.63■■■■□ 3.13
ARHGEF28Q8N1W1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC34.62■■■■□ 3.13
ARHGEF28Q8N1W1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
ARHGEF28Q8N1W1 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
ARHGEF28Q8N1W1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC34.61■■■■□ 3.13
ARHGEF28Q8N1W1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC34.61■■■■□ 3.13
ARHGEF28Q8N1W1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
ARHGEF28Q8N1W1 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC34.6■■■■□ 3.13
ARHGEF28Q8N1W1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
ARHGEF28Q8N1W1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC34.6■■■■□ 3.13
ARHGEF28Q8N1W1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
ARHGEF28Q8N1W1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
ARHGEF28Q8N1W1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC34.6■■■■□ 3.13
ARHGEF28Q8N1W1 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC34.59■■■■□ 3.13
ARHGEF28Q8N1W1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC34.59■■■■□ 3.13
ARHGEF28Q8N1W1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC34.59■■■■□ 3.13
ARHGEF28Q8N1W1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
ARHGEF28Q8N1W1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC34.57■■■■□ 3.12
ARHGEF28Q8N1W1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
ARHGEF28Q8N1W1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC34.57■■■■□ 3.12
ARHGEF28Q8N1W1 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC34.57■■■■□ 3.12
ARHGEF28Q8N1W1 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC34.56■■■■□ 3.12
ARHGEF28Q8N1W1 PVT1_1.1-201ENST00000615125 194 ntBASIC34.56■■■■□ 3.12
ARHGEF28Q8N1W1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
ARHGEF28Q8N1W1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
ARHGEF28Q8N1W1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC34.55■■■■□ 3.12
ARHGEF28Q8N1W1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC34.55■■■■□ 3.12
ARHGEF28Q8N1W1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
ARHGEF28Q8N1W1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC34.55■■■■□ 3.12
ARHGEF28Q8N1W1 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC34.54■■■■□ 3.12
ARHGEF28Q8N1W1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC34.54■■■■□ 3.12
ARHGEF28Q8N1W1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC34.54■■■■□ 3.12
ARHGEF28Q8N1W1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC34.54■■■■□ 3.12
ARHGEF28Q8N1W1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC34.54■■■■□ 3.12
ARHGEF28Q8N1W1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
ARHGEF28Q8N1W1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC34.53■■■■□ 3.12
ARHGEF28Q8N1W1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
ARHGEF28Q8N1W1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC34.52■■■■□ 3.12
ARHGEF28Q8N1W1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC34.52■■■■□ 3.12
ARHGEF28Q8N1W1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC34.52■■■■□ 3.12
ARHGEF28Q8N1W1 LINC01003-201ENST00000564834 1764 ntBASIC34.52■■■■□ 3.12
ARHGEF28Q8N1W1 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC34.52■■■■□ 3.12
ARHGEF28Q8N1W1 AL449106.1-201ENST00000608517 1980 ntBASIC34.52■■■■□ 3.12
ARHGEF28Q8N1W1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
ARHGEF28Q8N1W1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC34.52■■■■□ 3.12
ARHGEF28Q8N1W1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC34.51■■■■□ 3.12
ARHGEF28Q8N1W1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
ARHGEF28Q8N1W1 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
ARHGEF28Q8N1W1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC34.5■■■■□ 3.11
ARHGEF28Q8N1W1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
ARHGEF28Q8N1W1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
ARHGEF28Q8N1W1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC34.49■■■■□ 3.11
ARHGEF28Q8N1W1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
ARHGEF28Q8N1W1 AC010980.1-201ENST00000587192 1142 ntBASIC34.49■■■■□ 3.11
ARHGEF28Q8N1W1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC34.48■■■■□ 3.11
ARHGEF28Q8N1W1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC34.48■■■■□ 3.11
ARHGEF28Q8N1W1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC34.48■■■■□ 3.11
ARHGEF28Q8N1W1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
ARHGEF28Q8N1W1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC34.48■■■■□ 3.11
ARHGEF28Q8N1W1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC34.48■■■■□ 3.11
ARHGEF28Q8N1W1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC34.47■■■■□ 3.11
ARHGEF28Q8N1W1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC34.47■■■■□ 3.11
ARHGEF28Q8N1W1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
ARHGEF28Q8N1W1 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC34.46■■■■□ 3.11
ARHGEF28Q8N1W1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
ARHGEF28Q8N1W1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
ARHGEF28Q8N1W1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC34.46■■■■□ 3.11
ARHGEF28Q8N1W1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC34.46■■■■□ 3.11
ARHGEF28Q8N1W1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC34.45■■■■□ 3.11
ARHGEF28Q8N1W1 AC139795.1-202ENST00000500444 432 ntBASIC34.44■■■■□ 3.1
ARHGEF28Q8N1W1 MIR4508-201ENST00000584178 70 ntBASIC34.44■■■■□ 3.1
ARHGEF28Q8N1W1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC34.44■■■■□ 3.1
ARHGEF28Q8N1W1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
ARHGEF28Q8N1W1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC34.43■■■■□ 3.1
ARHGEF28Q8N1W1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
ARHGEF28Q8N1W1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
ARHGEF28Q8N1W1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC34.43■■■■□ 3.1
ARHGEF28Q8N1W1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC34.43■■■■□ 3.1
ARHGEF28Q8N1W1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC34.43■■■■□ 3.1
ARHGEF28Q8N1W1 AC139426.1-201ENST00000568218 2529 ntBASIC34.43■■■■□ 3.1
ARHGEF28Q8N1W1 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC34.42■■■■□ 3.1
ARHGEF28Q8N1W1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC34.42■■■■□ 3.1
ARHGEF28Q8N1W1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC34.42■■■■□ 3.1
ARHGEF28Q8N1W1 AL035685.1-201ENST00000636663 812 ntBASIC34.42■■■■□ 3.1
ARHGEF28Q8N1W1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms