Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC25.36■■□□□ 1.65
SIX5Q8N196 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC25.36■■□□□ 1.65
SIX5Q8N196 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC25.36■■□□□ 1.65
SIX5Q8N196 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SIX5Q8N196 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
SIX5Q8N196 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SIX5Q8N196 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.35■■□□□ 1.65
SIX5Q8N196 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SIX5Q8N196 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
SIX5Q8N196 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SIX5Q8N196 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC25.34■■□□□ 1.65
SIX5Q8N196 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.34■■□□□ 1.65
SIX5Q8N196 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SIX5Q8N196 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SIX5Q8N196 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.33■■□□□ 1.65
SIX5Q8N196 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SIX5Q8N196 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
SIX5Q8N196 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
SIX5Q8N196 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
SIX5Q8N196 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.32■■□□□ 1.64
SIX5Q8N196 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SIX5Q8N196 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.32■■□□□ 1.64
SIX5Q8N196 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SIX5Q8N196 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.31■■□□□ 1.64
SIX5Q8N196 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
SIX5Q8N196 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
SIX5Q8N196 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SIX5Q8N196 GRAMD4P7-201ENST00000578182 1232 ntBASIC25.3■■□□□ 1.64
SIX5Q8N196 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SIX5Q8N196 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
SIX5Q8N196 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.29■■□□□ 1.64
SIX5Q8N196 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SIX5Q8N196 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SIX5Q8N196 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SIX5Q8N196 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SIX5Q8N196 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC25.28■■□□□ 1.64
SIX5Q8N196 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
SIX5Q8N196 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SIX5Q8N196 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
SIX5Q8N196 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SIX5Q8N196 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
SIX5Q8N196 Z92544.1-202ENST00000571933 1220 ntBASIC25.27■■□□□ 1.64
SIX5Q8N196 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SIX5Q8N196 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SIX5Q8N196 CREM-229ENST00000474362 1030 ntTSL 2 BASIC25.26■■□□□ 1.63
SIX5Q8N196 TK2-216ENST00000564917 1156 ntTSL 3 BASIC25.26■■□□□ 1.63
SIX5Q8N196 AC019171.1-201ENST00000601251 1056 ntBASIC25.26■■□□□ 1.63
SIX5Q8N196 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC25.26■■□□□ 1.63
SIX5Q8N196 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
SIX5Q8N196 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
SIX5Q8N196 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SIX5Q8N196 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SIX5Q8N196 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
SIX5Q8N196 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
SIX5Q8N196 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.25■■□□□ 1.63
SIX5Q8N196 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
SIX5Q8N196 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.24■■□□□ 1.63
SIX5Q8N196 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC25.24■■□□□ 1.63
SIX5Q8N196 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
SIX5Q8N196 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.23■■□□□ 1.63
SIX5Q8N196 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
SIX5Q8N196 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SIX5Q8N196 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
SIX5Q8N196 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25.23■■□□□ 1.63
SIX5Q8N196 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.23■■□□□ 1.63
SIX5Q8N196 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SIX5Q8N196 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.22■■□□□ 1.63
SIX5Q8N196 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.22■■□□□ 1.63
SIX5Q8N196 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SIX5Q8N196 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.21■■□□□ 1.63
SIX5Q8N196 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.21■■□□□ 1.63
SIX5Q8N196 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.21■■□□□ 1.63
SIX5Q8N196 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.21■■□□□ 1.63
SIX5Q8N196 AL359504.2-201ENST00000605506 1601 ntBASIC25.21■■□□□ 1.63
SIX5Q8N196 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SIX5Q8N196 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SIX5Q8N196 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC25.2■■□□□ 1.62
SIX5Q8N196 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.2■■□□□ 1.62
SIX5Q8N196 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC25.2■■□□□ 1.62
SIX5Q8N196 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC25.2■■□□□ 1.62
SIX5Q8N196 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.2■■□□□ 1.62
SIX5Q8N196 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC25.2■■□□□ 1.62
SIX5Q8N196 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.19■■□□□ 1.62
SIX5Q8N196 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SIX5Q8N196 AC087393.1-201ENST00000582896 145 ntBASIC25.19■■□□□ 1.62
SIX5Q8N196 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
SIX5Q8N196 ST7-AS1-201ENST00000456775 1889 ntBASIC25.19■■□□□ 1.62
SIX5Q8N196 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SIX5Q8N196 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SIX5Q8N196 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.18■■□□□ 1.62
SIX5Q8N196 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SIX5Q8N196 KRT125P-201ENST00000546827 989 ntBASIC25.17■■□□□ 1.62
SIX5Q8N196 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
SIX5Q8N196 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.16■■□□□ 1.62
SIX5Q8N196 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SIX5Q8N196 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
SIX5Q8N196 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SIX5Q8N196 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SIX5Q8N196 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.15■■□□□ 1.62
SIX5Q8N196 AC139426.1-201ENST00000568218 2529 ntBASIC25.15■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms