Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC30.58■■■□□ 2.49
SMC5Q8IY18 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SMC5Q8IY18 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.58■■■□□ 2.49
SMC5Q8IY18 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC30.58■■■□□ 2.49
SMC5Q8IY18 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
SMC5Q8IY18 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
SMC5Q8IY18 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
SMC5Q8IY18 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SMC5Q8IY18 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.57■■■□□ 2.48
SMC5Q8IY18 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
SMC5Q8IY18 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC30.57■■■□□ 2.48
SMC5Q8IY18 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
SMC5Q8IY18 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SMC5Q8IY18 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SMC5Q8IY18 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SMC5Q8IY18 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SMC5Q8IY18 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SMC5Q8IY18 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
SMC5Q8IY18 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC30.56■■■□□ 2.48
SMC5Q8IY18 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
SMC5Q8IY18 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC30.55■■■□□ 2.48
SMC5Q8IY18 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SMC5Q8IY18 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SMC5Q8IY18 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.54■■■□□ 2.48
SMC5Q8IY18 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
SMC5Q8IY18 MIR3648-2-201ENST00000581792 180 ntBASIC30.54■■■□□ 2.48
SMC5Q8IY18 MIR3648-1-201ENST00000615959 180 ntBASIC30.54■■■□□ 2.48
SMC5Q8IY18 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SMC5Q8IY18 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC30.53■■■□□ 2.48
SMC5Q8IY18 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SMC5Q8IY18 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.53■■■□□ 2.48
SMC5Q8IY18 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
SMC5Q8IY18 MED25-210ENST00000612854 801 ntTSL 5 BASIC30.53■■■□□ 2.48
SMC5Q8IY18 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
SMC5Q8IY18 MED25-214ENST00000622402 642 ntTSL 5 BASIC30.53■■■□□ 2.48
SMC5Q8IY18 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SMC5Q8IY18 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.52■■■□□ 2.48
SMC5Q8IY18 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
SMC5Q8IY18 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SMC5Q8IY18 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
SMC5Q8IY18 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC30.51■■■□□ 2.47
SMC5Q8IY18 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
SMC5Q8IY18 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SMC5Q8IY18 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC30.5■■■□□ 2.47
SMC5Q8IY18 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC30.49■■■□□ 2.47
SMC5Q8IY18 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC30.49■■■□□ 2.47
SMC5Q8IY18 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
SMC5Q8IY18 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
SMC5Q8IY18 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
SMC5Q8IY18 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC30.49■■■□□ 2.47
SMC5Q8IY18 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
SMC5Q8IY18 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SMC5Q8IY18 AL359258.2-201ENST00000564063 1566 ntBASIC30.47■■■□□ 2.47
SMC5Q8IY18 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SMC5Q8IY18 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC30.47■■■□□ 2.47
SMC5Q8IY18 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SMC5Q8IY18 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
SMC5Q8IY18 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC30.46■■■□□ 2.47
SMC5Q8IY18 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC30.46■■■□□ 2.47
SMC5Q8IY18 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SMC5Q8IY18 AC020928.2-201ENST00000588717 2197 ntBASIC30.45■■■□□ 2.47
SMC5Q8IY18 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.46
SMC5Q8IY18 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
SMC5Q8IY18 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
SMC5Q8IY18 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC30.44■■■□□ 2.46
SMC5Q8IY18 ERN1-208ENST00000606895 2068 ntBASIC30.43■■■□□ 2.46
SMC5Q8IY18 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
SMC5Q8IY18 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SMC5Q8IY18 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SMC5Q8IY18 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC30.42■■■□□ 2.46
SMC5Q8IY18 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC30.42■■■□□ 2.46
SMC5Q8IY18 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC30.42■■■□□ 2.46
SMC5Q8IY18 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC30.42■■■□□ 2.46
SMC5Q8IY18 AC016575.1-201ENST00000607026 382 ntBASIC30.42■■■□□ 2.46
SMC5Q8IY18 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC30.42■■■□□ 2.46
SMC5Q8IY18 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.41■■■□□ 2.46
SMC5Q8IY18 AL359504.2-201ENST00000605506 1601 ntBASIC30.41■■■□□ 2.46
SMC5Q8IY18 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.41■■■□□ 2.46
SMC5Q8IY18 AC135731.1-201ENST00000569415 2548 ntBASIC30.41■■■□□ 2.46
SMC5Q8IY18 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC30.4■■■□□ 2.46
SMC5Q8IY18 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SMC5Q8IY18 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC30.4■■■□□ 2.46
SMC5Q8IY18 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC30.4■■■□□ 2.46
SMC5Q8IY18 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SMC5Q8IY18 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SMC5Q8IY18 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SMC5Q8IY18 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SMC5Q8IY18 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SMC5Q8IY18 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SMC5Q8IY18 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
SMC5Q8IY18 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SMC5Q8IY18 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SMC5Q8IY18 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SMC5Q8IY18 AC010501.1-201ENST00000606270 1962 ntBASIC30.39■■■□□ 2.46
SMC5Q8IY18 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.46
SMC5Q8IY18 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.39■■■□□ 2.46
SMC5Q8IY18 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.39■■■□□ 2.46
SMC5Q8IY18 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.39■■■□□ 2.46
SMC5Q8IY18 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
SMC5Q8IY18 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms