Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 AC012354.3-201ENST00000623734 483 ntBASIC25.79■■□□□ 1.72
SNX30Q5VWJ9 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SNX30Q5VWJ9 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SNX30Q5VWJ9 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.79■■□□□ 1.72
SNX30Q5VWJ9 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.79■■□□□ 1.72
SNX30Q5VWJ9 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.78■■□□□ 1.72
SNX30Q5VWJ9 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
SNX30Q5VWJ9 MIR3960-201ENST00000583311 91 ntBASIC25.78■■□□□ 1.72
SNX30Q5VWJ9 AC026202.3-201ENST00000600805 1127 ntBASIC25.78■■□□□ 1.72
SNX30Q5VWJ9 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SNX30Q5VWJ9 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SNX30Q5VWJ9 AC009831.1-201ENST00000580420 1582 ntBASIC25.78■■□□□ 1.72
SNX30Q5VWJ9 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SNX30Q5VWJ9 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SNX30Q5VWJ9 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SNX30Q5VWJ9 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SNX30Q5VWJ9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
SNX30Q5VWJ9 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
SNX30Q5VWJ9 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SNX30Q5VWJ9 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.76■■□□□ 1.71
SNX30Q5VWJ9 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.76■■□□□ 1.71
SNX30Q5VWJ9 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SNX30Q5VWJ9 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SNX30Q5VWJ9 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.76■■□□□ 1.71
SNX30Q5VWJ9 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SNX30Q5VWJ9 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SNX30Q5VWJ9 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SNX30Q5VWJ9 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.75■■□□□ 1.71
SNX30Q5VWJ9 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
SNX30Q5VWJ9 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SNX30Q5VWJ9 AC133552.2-201ENST00000619106 1032 ntBASIC25.75■■□□□ 1.71
SNX30Q5VWJ9 BX255925.1-201ENST00000566954 1854 ntBASIC25.74■■□□□ 1.71
SNX30Q5VWJ9 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SNX30Q5VWJ9 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
SNX30Q5VWJ9 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
SNX30Q5VWJ9 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SNX30Q5VWJ9 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.73■■□□□ 1.71
SNX30Q5VWJ9 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
SNX30Q5VWJ9 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.73■■□□□ 1.71
SNX30Q5VWJ9 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
SNX30Q5VWJ9 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SNX30Q5VWJ9 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.73■■□□□ 1.71
SNX30Q5VWJ9 RAP2CP1-202ENST00000605179 643 ntBASIC25.73■■□□□ 1.71
SNX30Q5VWJ9 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
SNX30Q5VWJ9 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.73■■□□□ 1.71
SNX30Q5VWJ9 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
SNX30Q5VWJ9 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SNX30Q5VWJ9 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SNX30Q5VWJ9 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SNX30Q5VWJ9 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SNX30Q5VWJ9 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SNX30Q5VWJ9 AC093536.1-201ENST00000569153 554 ntBASIC25.72■■□□□ 1.71
SNX30Q5VWJ9 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SNX30Q5VWJ9 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SNX30Q5VWJ9 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SNX30Q5VWJ9 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
SNX30Q5VWJ9 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SNX30Q5VWJ9 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.71■■□□□ 1.71
SNX30Q5VWJ9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SNX30Q5VWJ9 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
SNX30Q5VWJ9 AL449106.1-201ENST00000608517 1980 ntBASIC25.71■■□□□ 1.71
SNX30Q5VWJ9 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.7■■□□□ 1.7
SNX30Q5VWJ9 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
SNX30Q5VWJ9 AL592293.1-201ENST00000502889 1188 ntBASIC25.7■■□□□ 1.7
SNX30Q5VWJ9 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
SNX30Q5VWJ9 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.7■■□□□ 1.7
SNX30Q5VWJ9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SNX30Q5VWJ9 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SNX30Q5VWJ9 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SNX30Q5VWJ9 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SNX30Q5VWJ9 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
SNX30Q5VWJ9 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SNX30Q5VWJ9 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SNX30Q5VWJ9 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.68■■□□□ 1.7
SNX30Q5VWJ9 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SNX30Q5VWJ9 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
SNX30Q5VWJ9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.67■■□□□ 1.7
SNX30Q5VWJ9 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC25.67■■□□□ 1.7
SNX30Q5VWJ9 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SNX30Q5VWJ9 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SNX30Q5VWJ9 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SNX30Q5VWJ9 AC004987.1-201ENST00000428627 508 ntBASIC25.66■■□□□ 1.7
SNX30Q5VWJ9 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
SNX30Q5VWJ9 AC129492.7-201ENST00000622992 756 ntBASIC25.66■■□□□ 1.7
SNX30Q5VWJ9 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SNX30Q5VWJ9 TSPY13P-201ENST00000338964 914 ntBASIC25.65■■□□□ 1.7
SNX30Q5VWJ9 ATP5G2P3-201ENST00000429083 425 ntBASIC25.65■■□□□ 1.7
SNX30Q5VWJ9 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
SNX30Q5VWJ9 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SNX30Q5VWJ9 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SNX30Q5VWJ9 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
SNX30Q5VWJ9 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.63■■□□□ 1.69
SNX30Q5VWJ9 AL033527.3-201ENST00000566366 1196 ntBASIC25.63■■□□□ 1.69
SNX30Q5VWJ9 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
SNX30Q5VWJ9 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
SNX30Q5VWJ9 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SNX30Q5VWJ9 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SNX30Q5VWJ9 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SNX30Q5VWJ9 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.61■■□□□ 1.69
SNX30Q5VWJ9 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms