Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 MIR639-201ENST00000384974 98 ntBASIC21.4■■□□□ 1.02
RSPO1Q2MKA7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.4■■□□□ 1.02
RSPO1Q2MKA7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
RSPO1Q2MKA7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.02
RSPO1Q2MKA7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RSPO1Q2MKA7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.39■■□□□ 1.01
RSPO1Q2MKA7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
RSPO1Q2MKA7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
RSPO1Q2MKA7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RSPO1Q2MKA7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RSPO1Q2MKA7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
RSPO1Q2MKA7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
RSPO1Q2MKA7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RSPO1Q2MKA7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.37■■□□□ 1.01
RSPO1Q2MKA7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
RSPO1Q2MKA7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RSPO1Q2MKA7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.36■■□□□ 1.01
RSPO1Q2MKA7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RSPO1Q2MKA7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RSPO1Q2MKA7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RSPO1Q2MKA7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
RSPO1Q2MKA7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.35■■□□□ 1.01
RSPO1Q2MKA7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RSPO1Q2MKA7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
RSPO1Q2MKA7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.35■■□□□ 1.01
RSPO1Q2MKA7 AL359504.2-201ENST00000605506 1601 ntBASIC21.35■■□□□ 1.01
RSPO1Q2MKA7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RSPO1Q2MKA7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RSPO1Q2MKA7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RSPO1Q2MKA7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RSPO1Q2MKA7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RSPO1Q2MKA7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RSPO1Q2MKA7 AC092803.2-201ENST00000564287 1899 ntBASIC21.34■■□□□ 1.01
RSPO1Q2MKA7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RSPO1Q2MKA7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.34■■□□□ 1.01
RSPO1Q2MKA7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RSPO1Q2MKA7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
RSPO1Q2MKA7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RSPO1Q2MKA7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RSPO1Q2MKA7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RSPO1Q2MKA7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RSPO1Q2MKA7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.33■■□□□ 1.01
RSPO1Q2MKA7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RSPO1Q2MKA7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
RSPO1Q2MKA7 AC145676.1-201ENST00000514988 2004 ntBASIC21.33■■□□□ 1
RSPO1Q2MKA7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.33■■□□□ 1
RSPO1Q2MKA7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.32■■□□□ 1
RSPO1Q2MKA7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RSPO1Q2MKA7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RSPO1Q2MKA7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RSPO1Q2MKA7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RSPO1Q2MKA7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.31■■□□□ 1
RSPO1Q2MKA7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.31■■□□□ 1
RSPO1Q2MKA7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RSPO1Q2MKA7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.3■■□□□ 1
RSPO1Q2MKA7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RSPO1Q2MKA7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.29■■□□□ 1
RSPO1Q2MKA7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.29■■□□□ 1
RSPO1Q2MKA7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.29■■□□□ 1
RSPO1Q2MKA7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.29■■□□□ 1
RSPO1Q2MKA7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RSPO1Q2MKA7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.29■■□□□ 1
RSPO1Q2MKA7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.29■■□□□ 1
RSPO1Q2MKA7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RSPO1Q2MKA7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RSPO1Q2MKA7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RSPO1Q2MKA7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RSPO1Q2MKA7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.29■■□□□ 1
RSPO1Q2MKA7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
RSPO1Q2MKA7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.28■■□□□ 1
RSPO1Q2MKA7 DUSP8P4-201ENST00000399538 1761 ntBASIC21.28■■□□□ 1
RSPO1Q2MKA7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RSPO1Q2MKA7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.28■■□□□ 1
RSPO1Q2MKA7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
RSPO1Q2MKA7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RSPO1Q2MKA7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.28■■□□□ 1
RSPO1Q2MKA7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.28■■□□□ 1
RSPO1Q2MKA7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
RSPO1Q2MKA7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.28■■□□□ 1
RSPO1Q2MKA7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.27■■□□□ 1
RSPO1Q2MKA7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RSPO1Q2MKA7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RSPO1Q2MKA7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
RSPO1Q2MKA7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RSPO1Q2MKA7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RSPO1Q2MKA7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RSPO1Q2MKA7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.26■□□□□ 0.99
RSPO1Q2MKA7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RSPO1Q2MKA7 AC126177.7-201ENST00000547904 679 ntBASIC21.26■□□□□ 0.99
RSPO1Q2MKA7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
RSPO1Q2MKA7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
RSPO1Q2MKA7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.25■□□□□ 0.99
RSPO1Q2MKA7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RSPO1Q2MKA7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RSPO1Q2MKA7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RSPO1Q2MKA7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RSPO1Q2MKA7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RSPO1Q2MKA7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
RSPO1Q2MKA7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RSPO1Q2MKA7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms