Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.34■■□□□ 1.17
GDF1P27539 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
GDF1P27539 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.34■■□□□ 1.17
GDF1P27539 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
GDF1P27539 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
GDF1P27539 AC093536.1-201ENST00000569153 554 ntBASIC22.33■■□□□ 1.17
GDF1P27539 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
GDF1P27539 AC009831.1-201ENST00000580420 1582 ntBASIC22.33■■□□□ 1.16
GDF1P27539 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.33■■□□□ 1.16
GDF1P27539 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
GDF1P27539 KRT18P60-201ENST00000312876 1297 ntBASIC22.32■■□□□ 1.16
GDF1P27539 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.32■■□□□ 1.16
GDF1P27539 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
GDF1P27539 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
GDF1P27539 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
GDF1P27539 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
GDF1P27539 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
GDF1P27539 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.31■■□□□ 1.16
GDF1P27539 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
GDF1P27539 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
GDF1P27539 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.3■■□□□ 1.16
GDF1P27539 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
GDF1P27539 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.29■■□□□ 1.16
GDF1P27539 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
GDF1P27539 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
GDF1P27539 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
GDF1P27539 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.29■■□□□ 1.16
GDF1P27539 AC026202.3-201ENST00000600805 1127 ntBASIC22.29■■□□□ 1.16
GDF1P27539 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
GDF1P27539 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.28■■□□□ 1.16
GDF1P27539 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
GDF1P27539 AL592293.1-201ENST00000502889 1188 ntBASIC22.28■■□□□ 1.16
GDF1P27539 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
GDF1P27539 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
GDF1P27539 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
GDF1P27539 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.26■■□□□ 1.15
GDF1P27539 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
GDF1P27539 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
GDF1P27539 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
GDF1P27539 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
GDF1P27539 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
GDF1P27539 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
GDF1P27539 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
GDF1P27539 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
GDF1P27539 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
GDF1P27539 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
GDF1P27539 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
GDF1P27539 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
GDF1P27539 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.24■■□□□ 1.15
GDF1P27539 AL033527.3-201ENST00000566366 1196 ntBASIC22.24■■□□□ 1.15
GDF1P27539 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
GDF1P27539 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
GDF1P27539 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
GDF1P27539 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
GDF1P27539 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC22.23■■□□□ 1.15
GDF1P27539 RAP2CP1-202ENST00000605179 643 ntBASIC22.23■■□□□ 1.15
GDF1P27539 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
GDF1P27539 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
GDF1P27539 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.22■■□□□ 1.15
GDF1P27539 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.22■■□□□ 1.15
GDF1P27539 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
GDF1P27539 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
GDF1P27539 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
GDF1P27539 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
GDF1P27539 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
GDF1P27539 TSPY13P-201ENST00000338964 914 ntBASIC22.21■■□□□ 1.15
GDF1P27539 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
GDF1P27539 AC004987.1-201ENST00000428627 508 ntBASIC22.21■■□□□ 1.15
GDF1P27539 ATP5G2P3-201ENST00000429083 425 ntBASIC22.21■■□□□ 1.15
GDF1P27539 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
GDF1P27539 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.21■■□□□ 1.15
GDF1P27539 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.2■■□□□ 1.14
GDF1P27539 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
GDF1P27539 AC129492.7-201ENST00000622992 756 ntBASIC22.2■■□□□ 1.14
GDF1P27539 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
GDF1P27539 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
GDF1P27539 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.19■■□□□ 1.14
GDF1P27539 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
GDF1P27539 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.19■■□□□ 1.14
GDF1P27539 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
GDF1P27539 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
GDF1P27539 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
GDF1P27539 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
GDF1P27539 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
GDF1P27539 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
GDF1P27539 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
GDF1P27539 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
GDF1P27539 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.17■■□□□ 1.14
GDF1P27539 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.17■■□□□ 1.14
GDF1P27539 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
GDF1P27539 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.16■■□□□ 1.14
GDF1P27539 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
GDF1P27539 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
GDF1P27539 AC142472.1-201ENST00000612013 1741 ntBASIC22.16■■□□□ 1.14
GDF1P27539 AP004609.3-201ENST00000610705 1884 ntBASIC22.15■■□□□ 1.14
GDF1P27539 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
GDF1P27539 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
GDF1P27539 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.15■■□□□ 1.14
GDF1P27539 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
GDF1P27539 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms