Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LMO1P25800 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
LMO1P25800 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
LMO1P25800 MIR7108-201ENST00000614319 87 ntBASIC20.63■□□□□ 0.89
LMO1P25800 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LMO1P25800 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
LMO1P25800 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LMO1P25800 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LMO1P25800 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.62■□□□□ 0.89
LMO1P25800 AC091060.1-201ENST00000623524 1766 ntBASIC20.62■□□□□ 0.89
LMO1P25800 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LMO1P25800 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LMO1P25800 AC016575.1-201ENST00000607026 382 ntBASIC20.61■□□□□ 0.89
LMO1P25800 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.6■□□□□ 0.89
LMO1P25800 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LMO1P25800 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.6■□□□□ 0.89
LMO1P25800 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
LMO1P25800 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.6■□□□□ 0.89
LMO1P25800 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LMO1P25800 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.6■□□□□ 0.89
LMO1P25800 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.59■□□□□ 0.89
LMO1P25800 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.59■□□□□ 0.89
LMO1P25800 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LMO1P25800 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LMO1P25800 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LMO1P25800 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
LMO1P25800 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
LMO1P25800 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.58■□□□□ 0.89
LMO1P25800 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LMO1P25800 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LMO1P25800 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LMO1P25800 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
LMO1P25800 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LMO1P25800 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LMO1P25800 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LMO1P25800 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.57■□□□□ 0.88
LMO1P25800 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
LMO1P25800 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LMO1P25800 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LMO1P25800 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
LMO1P25800 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LMO1P25800 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LMO1P25800 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.56■□□□□ 0.88
LMO1P25800 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.56■□□□□ 0.88
LMO1P25800 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LMO1P25800 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LMO1P25800 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.56■□□□□ 0.88
LMO1P25800 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
LMO1P25800 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LMO1P25800 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
LMO1P25800 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
LMO1P25800 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.56■□□□□ 0.88
LMO1P25800 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LMO1P25800 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LMO1P25800 AL359258.2-201ENST00000564063 1566 ntBASIC20.55■□□□□ 0.88
LMO1P25800 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.55■□□□□ 0.88
LMO1P25800 AC145676.1-201ENST00000514988 2004 ntBASIC20.55■□□□□ 0.88
LMO1P25800 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
LMO1P25800 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LMO1P25800 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LMO1P25800 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LMO1P25800 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LMO1P25800 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.54■□□□□ 0.88
LMO1P25800 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LMO1P25800 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LMO1P25800 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LMO1P25800 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LMO1P25800 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
LMO1P25800 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
LMO1P25800 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.53■□□□□ 0.88
LMO1P25800 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LMO1P25800 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.53■□□□□ 0.88
LMO1P25800 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
LMO1P25800 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LMO1P25800 AC092803.2-201ENST00000564287 1899 ntBASIC20.53■□□□□ 0.88
LMO1P25800 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.53■□□□□ 0.88
LMO1P25800 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LMO1P25800 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.53■□□□□ 0.88
LMO1P25800 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LMO1P25800 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
LMO1P25800 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LMO1P25800 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.52■□□□□ 0.87
LMO1P25800 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
LMO1P25800 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LMO1P25800 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LMO1P25800 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LMO1P25800 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.51■□□□□ 0.87
LMO1P25800 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.51■□□□□ 0.87
LMO1P25800 AC126177.7-201ENST00000547904 679 ntBASIC20.51■□□□□ 0.87
LMO1P25800 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.51■□□□□ 0.87
LMO1P25800 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
LMO1P25800 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LMO1P25800 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LMO1P25800 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LMO1P25800 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LMO1P25800 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LMO1P25800 DUSP8P4-201ENST00000399538 1761 ntBASIC20.5■□□□□ 0.87
LMO1P25800 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.5■□□□□ 0.87
LMO1P25800 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LMO1P25800 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms