Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CD58P19256 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
CD58P19256 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CD58P19256 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CD58P19256 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
CD58P19256 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CD58P19256 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CD58P19256 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.38■■□□□ 1.81
CD58P19256 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CD58P19256 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CD58P19256 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.37■■□□□ 1.81
CD58P19256 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.37■■□□□ 1.81
CD58P19256 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.37■■□□□ 1.81
CD58P19256 AL157400.5-201ENST00000507624 621 ntBASIC26.37■■□□□ 1.81
CD58P19256 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.37■■□□□ 1.81
CD58P19256 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CD58P19256 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CD58P19256 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.36■■□□□ 1.81
CD58P19256 AL359504.2-201ENST00000605506 1601 ntBASIC26.35■■□□□ 1.81
CD58P19256 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CD58P19256 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CD58P19256 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CD58P19256 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.34■■□□□ 1.81
CD58P19256 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CD58P19256 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CD58P19256 AC142472.1-201ENST00000612013 1741 ntBASIC26.34■■□□□ 1.81
CD58P19256 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CD58P19256 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.33■■□□□ 1.81
CD58P19256 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CD58P19256 AC092296.2-201ENST00000589470 999 ntBASIC26.33■■□□□ 1.81
CD58P19256 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
CD58P19256 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.32■■□□□ 1.8
CD58P19256 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.32■■□□□ 1.8
CD58P19256 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CD58P19256 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.31■■□□□ 1.8
CD58P19256 HSD17B1P1-201ENST00000590052 955 ntBASIC26.31■■□□□ 1.8
CD58P19256 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CD58P19256 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.3■■□□□ 1.8
CD58P19256 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CD58P19256 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CD58P19256 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.29■■□□□ 1.8
CD58P19256 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CD58P19256 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.29■■□□□ 1.8
CD58P19256 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.28■■□□□ 1.8
CD58P19256 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
CD58P19256 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CD58P19256 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.28■■□□□ 1.8
CD58P19256 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CD58P19256 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CD58P19256 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
CD58P19256 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CD58P19256 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CD58P19256 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CD58P19256 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
CD58P19256 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.26■■□□□ 1.79
CD58P19256 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CD58P19256 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
CD58P19256 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CD58P19256 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CD58P19256 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.25■■□□□ 1.79
CD58P19256 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
CD58P19256 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.24■■□□□ 1.79
CD58P19256 ECEL1P2-201ENST00000461596 1295 ntBASIC26.24■■□□□ 1.79
CD58P19256 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CD58P19256 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.24■■□□□ 1.79
CD58P19256 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
CD58P19256 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
CD58P19256 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.23■■□□□ 1.79
CD58P19256 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.23■■□□□ 1.79
CD58P19256 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.23■■□□□ 1.79
CD58P19256 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CD58P19256 RNF126P1-201ENST00000567452 1320 ntBASIC26.22■■□□□ 1.79
CD58P19256 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.22■■□□□ 1.79
CD58P19256 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.22■■□□□ 1.79
CD58P19256 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.22■■□□□ 1.79
CD58P19256 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CD58P19256 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CD58P19256 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.22■■□□□ 1.79
CD58P19256 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CD58P19256 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CD58P19256 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
CD58P19256 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
CD58P19256 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
CD58P19256 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CD58P19256 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
CD58P19256 SMPD5-203ENST00000639008 1464 ntBASIC26.2■■□□□ 1.78
CD58P19256 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.2■■□□□ 1.78
CD58P19256 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CD58P19256 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
CD58P19256 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CD58P19256 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.19■■□□□ 1.78
CD58P19256 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
CD58P19256 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CD58P19256 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CD58P19256 AC025884.2-201ENST00000553429 711 ntBASIC26.18■■□□□ 1.78
CD58P19256 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CD58P19256 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.17■■□□□ 1.78
CD58P19256 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CD58P19256 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.17■■□□□ 1.78
CD58P19256 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.17■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms