Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CSF1P09603 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSF1P09603 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.03■□□□□ 0.96
CSF1P09603 ERN1-208ENST00000606895 2068 ntBASIC21.03■□□□□ 0.96
CSF1P09603 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.03■□□□□ 0.96
CSF1P09603 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSF1P09603 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSF1P09603 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.02■□□□□ 0.96
CSF1P09603 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSF1P09603 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSF1P09603 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.02■□□□□ 0.96
CSF1P09603 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSF1P09603 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CSF1P09603 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.02■□□□□ 0.96
CSF1P09603 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSF1P09603 DUX4L29-201ENST00000425409 679 ntBASIC21.01■□□□□ 0.95
CSF1P09603 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSF1P09603 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CSF1P09603 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSF1P09603 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CSF1P09603 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSF1P09603 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21■□□□□ 0.95
CSF1P09603 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSF1P09603 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSF1P09603 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSF1P09603 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CSF1P09603 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.99■□□□□ 0.95
CSF1P09603 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CSF1P09603 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSF1P09603 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSF1P09603 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.99■□□□□ 0.95
CSF1P09603 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.98■□□□□ 0.95
CSF1P09603 AC135983.2-203ENST00000454486 1613 ntBASIC20.98■□□□□ 0.95
CSF1P09603 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSF1P09603 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSF1P09603 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSF1P09603 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.97■□□□□ 0.95
CSF1P09603 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.97■□□□□ 0.95
CSF1P09603 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSF1P09603 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSF1P09603 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSF1P09603 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSF1P09603 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CSF1P09603 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.96■□□□□ 0.95
CSF1P09603 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CSF1P09603 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CSF1P09603 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.96■□□□□ 0.95
CSF1P09603 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CSF1P09603 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSF1P09603 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CSF1P09603 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CSF1P09603 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
CSF1P09603 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CSF1P09603 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CSF1P09603 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSF1P09603 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSF1P09603 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSF1P09603 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CSF1P09603 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSF1P09603 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CSF1P09603 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CSF1P09603 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CSF1P09603 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSF1P09603 AC142381.3-201ENST00000568208 1670 ntBASIC20.93■□□□□ 0.94
CSF1P09603 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CSF1P09603 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.93■□□□□ 0.94
CSF1P09603 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CSF1P09603 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CSF1P09603 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CSF1P09603 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CSF1P09603 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CSF1P09603 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CSF1P09603 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.92■□□□□ 0.94
CSF1P09603 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.92■□□□□ 0.94
CSF1P09603 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CSF1P09603 AC142472.1-201ENST00000612013 1741 ntBASIC20.92■□□□□ 0.94
CSF1P09603 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CSF1P09603 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CSF1P09603 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSF1P09603 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSF1P09603 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSF1P09603 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CSF1P09603 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CSF1P09603 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.91■□□□□ 0.94
CSF1P09603 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSF1P09603 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CSF1P09603 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.9■□□□□ 0.94
CSF1P09603 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CSF1P09603 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSF1P09603 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSF1P09603 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSF1P09603 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CSF1P09603 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.89■□□□□ 0.93
CSF1P09603 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CSF1P09603 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CSF1P09603 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CSF1P09603 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CSF1P09603 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CSF1P09603 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSF1P09603 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms