Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
TCRAP04437 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TCRAP04437 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TCRAP04437 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TCRAP04437 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TCRAP04437 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TCRAP04437 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TCRAP04437 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TCRAP04437 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TCRAP04437 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRAP04437 SUZ12P1-203ENST00000578195 985 ntBASIC18.57■□□□□ 0.56
TCRAP04437 AC110285.7-201ENST00000624417 1536 ntBASIC18.57■□□□□ 0.56
TCRAP04437 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRAP04437 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRAP04437 AC142381.3-201ENST00000568208 1670 ntBASIC18.57■□□□□ 0.56
TCRAP04437 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TCRAP04437 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.56■□□□□ 0.56
TCRAP04437 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRAP04437 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TCRAP04437 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.55■□□□□ 0.56
TCRAP04437 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.55■□□□□ 0.56
TCRAP04437 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
TCRAP04437 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.55■□□□□ 0.56
TCRAP04437 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TCRAP04437 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TCRAP04437 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.54■□□□□ 0.56
TCRAP04437 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TCRAP04437 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.54■□□□□ 0.56
TCRAP04437 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TCRAP04437 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TCRAP04437 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TCRAP04437 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TCRAP04437 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
TCRAP04437 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TCRAP04437 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TCRAP04437 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TCRAP04437 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TCRAP04437 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TCRAP04437 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.53■□□□□ 0.56
TCRAP04437 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
TCRAP04437 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TCRAP04437 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TCRAP04437 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TCRAP04437 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.52■□□□□ 0.56
TCRAP04437 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TCRAP04437 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC18.52■□□□□ 0.56
TCRAP04437 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TCRAP04437 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TCRAP04437 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
TCRAP04437 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC18.51■□□□□ 0.55
TCRAP04437 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.51■□□□□ 0.55
TCRAP04437 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCRAP04437 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCRAP04437 DUX4L28-201ENST00000623687 678 ntBASIC18.5■□□□□ 0.55
TCRAP04437 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.5■□□□□ 0.55
TCRAP04437 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.5■□□□□ 0.55
TCRAP04437 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRAP04437 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRAP04437 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRAP04437 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRAP04437 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRAP04437 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRAP04437 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRAP04437 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TCRAP04437 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TCRAP04437 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCRAP04437 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TCRAP04437 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCRAP04437 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCRAP04437 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TCRAP04437 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TCRAP04437 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TCRAP04437 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TCRAP04437 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TCRAP04437 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.47■□□□□ 0.55
TCRAP04437 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TCRAP04437 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TCRAP04437 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRAP04437 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TCRAP04437 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRAP04437 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
TCRAP04437 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRAP04437 AC022211.4-201ENST00000625094 2161 ntBASIC18.46■□□□□ 0.55
TCRAP04437 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.45■□□□□ 0.54
TCRAP04437 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TCRAP04437 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.45■□□□□ 0.54
TCRAP04437 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TCRAP04437 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TCRAP04437 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.45■□□□□ 0.54
TCRAP04437 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TCRAP04437 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TCRAP04437 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TCRAP04437 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TCRAP04437 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TCRAP04437 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.44■□□□□ 0.54
TCRAP04437 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRAP04437 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.44■□□□□ 0.54
TCRAP04437 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TCRAP04437 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.44■□□□□ 0.54
TCRAP04437 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms