Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PPP1R3DO95685 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.09■■□□□ 1.13
PPP1R3DO95685 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.09■■□□□ 1.13
PPP1R3DO95685 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.09■■□□□ 1.13
PPP1R3DO95685 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
PPP1R3DO95685 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PPP1R3DO95685 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.08■■□□□ 1.13
PPP1R3DO95685 DUX4L13-201ENST00000554103 1267 ntBASIC22.08■■□□□ 1.13
PPP1R3DO95685 DUX4L15-201ENST00000611059 1267 ntBASIC22.08■■□□□ 1.13
PPP1R3DO95685 DUX4L23-201ENST00000615195 1269 ntBASIC22.08■■□□□ 1.13
PPP1R3DO95685 DUX4L24-201ENST00000617576 1269 ntBASIC22.08■■□□□ 1.13
PPP1R3DO95685 DUX4L22-201ENST00000618238 1269 ntBASIC22.08■■□□□ 1.13
PPP1R3DO95685 DUX4L20-201ENST00000619712 1269 ntBASIC22.08■■□□□ 1.13
PPP1R3DO95685 DUX4L21-201ENST00000622058 1269 ntBASIC22.08■■□□□ 1.13
PPP1R3DO95685 DUX4L10-201ENST00000622460 1267 ntBASIC22.08■■□□□ 1.13
PPP1R3DO95685 DUX4L25-201ENST00000624915 1269 ntBASIC22.08■■□□□ 1.13
PPP1R3DO95685 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PPP1R3DO95685 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PPP1R3DO95685 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
PPP1R3DO95685 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PPP1R3DO95685 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.07■■□□□ 1.12
PPP1R3DO95685 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
PPP1R3DO95685 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.07■■□□□ 1.12
PPP1R3DO95685 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
PPP1R3DO95685 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.07■■□□□ 1.12
PPP1R3DO95685 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PPP1R3DO95685 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC22.06■■□□□ 1.12
PPP1R3DO95685 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PPP1R3DO95685 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PPP1R3DO95685 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PPP1R3DO95685 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.06■■□□□ 1.12
PPP1R3DO95685 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PPP1R3DO95685 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
PPP1R3DO95685 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.05■■□□□ 1.12
PPP1R3DO95685 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.05■■□□□ 1.12
PPP1R3DO95685 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PPP1R3DO95685 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PPP1R3DO95685 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.04■■□□□ 1.12
PPP1R3DO95685 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.04■■□□□ 1.12
PPP1R3DO95685 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.04■■□□□ 1.12
PPP1R3DO95685 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PPP1R3DO95685 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
PPP1R3DO95685 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PPP1R3DO95685 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PPP1R3DO95685 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.03■■□□□ 1.12
PPP1R3DO95685 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
PPP1R3DO95685 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
PPP1R3DO95685 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.03■■□□□ 1.12
PPP1R3DO95685 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PPP1R3DO95685 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
PPP1R3DO95685 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
PPP1R3DO95685 DUX4L11-201ENST00000611504 1267 ntBASIC22.02■■□□□ 1.12
PPP1R3DO95685 DUX4L12-201ENST00000614593 1267 ntBASIC22.02■■□□□ 1.12
PPP1R3DO95685 DUX4L14-201ENST00000621227 1267 ntBASIC22.02■■□□□ 1.12
PPP1R3DO95685 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
PPP1R3DO95685 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PPP1R3DO95685 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PPP1R3DO95685 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
PPP1R3DO95685 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PPP1R3DO95685 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PPP1R3DO95685 MIR219A2-201ENST00000608502 1504 ntBASIC22.01■■□□□ 1.11
PPP1R3DO95685 ERN1-208ENST00000606895 2068 ntBASIC22■■□□□ 1.11
PPP1R3DO95685 AC008813.1-201ENST00000536597 885 ntBASIC22■■□□□ 1.11
PPP1R3DO95685 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22■■□□□ 1.11
PPP1R3DO95685 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PPP1R3DO95685 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PPP1R3DO95685 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PPP1R3DO95685 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PPP1R3DO95685 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PPP1R3DO95685 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.98■■□□□ 1.11
PPP1R3DO95685 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
PPP1R3DO95685 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.98■■□□□ 1.11
PPP1R3DO95685 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.98■■□□□ 1.11
PPP1R3DO95685 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PPP1R3DO95685 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PPP1R3DO95685 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PPP1R3DO95685 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PPP1R3DO95685 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PPP1R3DO95685 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PPP1R3DO95685 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.96■■□□□ 1.11
PPP1R3DO95685 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
PPP1R3DO95685 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PPP1R3DO95685 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PPP1R3DO95685 AC148477.6-201ENST00000623746 465 ntBASIC21.96■■□□□ 1.11
PPP1R3DO95685 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PPP1R3DO95685 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PPP1R3DO95685 AC010501.1-201ENST00000606270 1962 ntBASIC21.96■■□□□ 1.11
PPP1R3DO95685 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
PPP1R3DO95685 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.95■■□□□ 1.1
PPP1R3DO95685 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.95■■□□□ 1.1
PPP1R3DO95685 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PPP1R3DO95685 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PPP1R3DO95685 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.95■■□□□ 1.1
PPP1R3DO95685 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.95■■□□□ 1.1
PPP1R3DO95685 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PPP1R3DO95685 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
PPP1R3DO95685 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PPP1R3DO95685 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PPP1R3DO95685 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
PPP1R3DO95685 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms