Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
KDM1AO60341 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
KDM1AO60341 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
KDM1AO60341 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
KDM1AO60341 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.96■■□□□ 1.43
KDM1AO60341 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
KDM1AO60341 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
KDM1AO60341 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.95■■□□□ 1.42
KDM1AO60341 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.94■■□□□ 1.42
KDM1AO60341 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
KDM1AO60341 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.94■■□□□ 1.42
KDM1AO60341 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KDM1AO60341 AL449106.1-201ENST00000608517 1980 ntBASIC23.94■■□□□ 1.42
KDM1AO60341 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KDM1AO60341 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
KDM1AO60341 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
KDM1AO60341 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
KDM1AO60341 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KDM1AO60341 RARRES2P2-201ENST00000394842 485 ntBASIC23.93■■□□□ 1.42
KDM1AO60341 AL157400.5-201ENST00000507624 621 ntBASIC23.93■■□□□ 1.42
KDM1AO60341 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
KDM1AO60341 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.93■■□□□ 1.42
KDM1AO60341 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KDM1AO60341 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KDM1AO60341 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KDM1AO60341 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KDM1AO60341 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
KDM1AO60341 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
KDM1AO60341 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.92■■□□□ 1.42
KDM1AO60341 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
KDM1AO60341 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.92■■□□□ 1.42
KDM1AO60341 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
KDM1AO60341 SMPD5-203ENST00000639008 1464 ntBASIC23.91■■□□□ 1.42
KDM1AO60341 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
KDM1AO60341 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.91■■□□□ 1.42
KDM1AO60341 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
KDM1AO60341 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
KDM1AO60341 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
KDM1AO60341 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.9■■□□□ 1.42
KDM1AO60341 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
KDM1AO60341 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
KDM1AO60341 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.42
KDM1AO60341 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
KDM1AO60341 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.89■■□□□ 1.41
KDM1AO60341 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
KDM1AO60341 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
KDM1AO60341 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
KDM1AO60341 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
KDM1AO60341 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.88■■□□□ 1.41
KDM1AO60341 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.88■■□□□ 1.41
KDM1AO60341 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
KDM1AO60341 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
KDM1AO60341 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
KDM1AO60341 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
KDM1AO60341 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
KDM1AO60341 MIR3960-201ENST00000583311 91 ntBASIC23.87■■□□□ 1.41
KDM1AO60341 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
KDM1AO60341 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
KDM1AO60341 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
KDM1AO60341 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
KDM1AO60341 AL359504.2-201ENST00000605506 1601 ntBASIC23.86■■□□□ 1.41
KDM1AO60341 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.86■■□□□ 1.41
KDM1AO60341 AC025884.2-201ENST00000553429 711 ntBASIC23.86■■□□□ 1.41
KDM1AO60341 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
KDM1AO60341 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
KDM1AO60341 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
KDM1AO60341 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.85■■□□□ 1.41
KDM1AO60341 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
KDM1AO60341 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.85■■□□□ 1.41
KDM1AO60341 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
KDM1AO60341 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
KDM1AO60341 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
KDM1AO60341 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KDM1AO60341 AC142472.1-201ENST00000612013 1741 ntBASIC23.84■■□□□ 1.41
KDM1AO60341 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
KDM1AO60341 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
KDM1AO60341 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
KDM1AO60341 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
KDM1AO60341 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.84■■□□□ 1.41
KDM1AO60341 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
KDM1AO60341 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
KDM1AO60341 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.82■■□□□ 1.4
KDM1AO60341 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
KDM1AO60341 AC007029.1-201ENST00000604183 313 ntBASIC23.82■■□□□ 1.4
KDM1AO60341 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.82■■□□□ 1.4
KDM1AO60341 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KDM1AO60341 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
KDM1AO60341 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KDM1AO60341 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KDM1AO60341 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
KDM1AO60341 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
KDM1AO60341 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
KDM1AO60341 ABHD17AP5-201ENST00000580133 923 ntBASIC23.8■■□□□ 1.4
KDM1AO60341 AP004609.3-201ENST00000610705 1884 ntBASIC23.8■■□□□ 1.4
KDM1AO60341 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.8■■□□□ 1.4
KDM1AO60341 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
KDM1AO60341 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KDM1AO60341 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KDM1AO60341 RP9P-202ENST00000450133 1212 ntBASIC23.79■■□□□ 1.4
KDM1AO60341 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms