Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
ABCC4O15439 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ABCC4O15439 GFER-205ENST00000569451 517 ntTSL 5 BASIC31.52■■■□□ 2.64
ABCC4O15439 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
ABCC4O15439 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
ABCC4O15439 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
ABCC4O15439 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
ABCC4O15439 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC31.5■■■□□ 2.63
ABCC4O15439 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
ABCC4O15439 AL157400.5-201ENST00000507624 621 ntBASIC31.5■■■□□ 2.63
ABCC4O15439 MOB2-207ENST00000614710 705 ntTSL 5 BASIC31.5■■■□□ 2.63
ABCC4O15439 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
ABCC4O15439 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC31.5■■■□□ 2.63
ABCC4O15439 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
ABCC4O15439 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC31.49■■■□□ 2.63
ABCC4O15439 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.49■■■□□ 2.63
ABCC4O15439 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
ABCC4O15439 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
ABCC4O15439 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
ABCC4O15439 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC31.48■■■□□ 2.63
ABCC4O15439 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC31.48■■■□□ 2.63
ABCC4O15439 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
ABCC4O15439 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
ABCC4O15439 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC31.48■■■□□ 2.63
ABCC4O15439 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC31.48■■■□□ 2.63
ABCC4O15439 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
ABCC4O15439 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC31.47■■■□□ 2.63
ABCC4O15439 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
ABCC4O15439 AC004987.1-201ENST00000428627 508 ntBASIC31.47■■■□□ 2.63
ABCC4O15439 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
ABCC4O15439 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
ABCC4O15439 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC31.45■■■□□ 2.63
ABCC4O15439 TSPY13P-201ENST00000338964 914 ntBASIC31.45■■■□□ 2.62
ABCC4O15439 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC31.45■■■□□ 2.62
ABCC4O15439 AC126177.7-201ENST00000547904 679 ntBASIC31.45■■■□□ 2.62
ABCC4O15439 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
ABCC4O15439 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
ABCC4O15439 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
ABCC4O15439 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC31.44■■■□□ 2.62
ABCC4O15439 ATP5G2P3-201ENST00000429083 425 ntBASIC31.43■■■□□ 2.62
ABCC4O15439 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC31.43■■■□□ 2.62
ABCC4O15439 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
ABCC4O15439 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
ABCC4O15439 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC31.42■■■□□ 2.62
ABCC4O15439 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
ABCC4O15439 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC31.42■■■□□ 2.62
ABCC4O15439 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
ABCC4O15439 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
ABCC4O15439 PKM-203ENST00000389093 2279 ntTSL 5 BASIC31.41■■■□□ 2.62
ABCC4O15439 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC31.41■■■□□ 2.62
ABCC4O15439 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
ABCC4O15439 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
ABCC4O15439 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC31.41■■■□□ 2.62
ABCC4O15439 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
ABCC4O15439 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC31.4■■■□□ 2.62
ABCC4O15439 AL359258.2-201ENST00000564063 1566 ntBASIC31.4■■■□□ 2.62
ABCC4O15439 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
ABCC4O15439 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
ABCC4O15439 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
ABCC4O15439 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC31.39■■■□□ 2.62
ABCC4O15439 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
ABCC4O15439 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
ABCC4O15439 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC31.39■■■□□ 2.62
ABCC4O15439 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
ABCC4O15439 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
ABCC4O15439 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
ABCC4O15439 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
ABCC4O15439 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
ABCC4O15439 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC31.37■■■□□ 2.61
ABCC4O15439 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
ABCC4O15439 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
ABCC4O15439 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
ABCC4O15439 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC31.36■■■□□ 2.61
ABCC4O15439 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
ABCC4O15439 GUK1-208ENST00000366728 842 ntTSL 2 BASIC31.36■■■□□ 2.61
ABCC4O15439 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
ABCC4O15439 AC142472.1-201ENST00000612013 1741 ntBASIC31.36■■■□□ 2.61
ABCC4O15439 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.35■■■□□ 2.61
ABCC4O15439 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
ABCC4O15439 AP004609.3-201ENST00000610705 1884 ntBASIC31.34■■■□□ 2.61
ABCC4O15439 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC31.33■■■□□ 2.61
ABCC4O15439 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
ABCC4O15439 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC31.32■■■□□ 2.6
ABCC4O15439 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC31.32■■■□□ 2.6
ABCC4O15439 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC31.32■■■□□ 2.6
ABCC4O15439 AC007029.1-201ENST00000604183 313 ntBASIC31.32■■■□□ 2.6
ABCC4O15439 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
ABCC4O15439 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
ABCC4O15439 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
ABCC4O15439 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
ABCC4O15439 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
ABCC4O15439 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC31.31■■■□□ 2.6
ABCC4O15439 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
ABCC4O15439 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC31.31■■■□□ 2.6
ABCC4O15439 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
ABCC4O15439 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC31.29■■■□□ 2.6
ABCC4O15439 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC31.29■■■□□ 2.6
ABCC4O15439 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC31.29■■■□□ 2.6
ABCC4O15439 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
ABCC4O15439 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms