Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CASQ2O14958 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CASQ2O14958 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CASQ2O14958 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.23■■□□□ 1.31
CASQ2O14958 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.23■■□□□ 1.31
CASQ2O14958 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
CASQ2O14958 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.23■■□□□ 1.31
CASQ2O14958 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CASQ2O14958 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
CASQ2O14958 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
CASQ2O14958 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC23.22■■□□□ 1.31
CASQ2O14958 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
CASQ2O14958 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.22■■□□□ 1.31
CASQ2O14958 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
CASQ2O14958 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CASQ2O14958 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CASQ2O14958 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
CASQ2O14958 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CASQ2O14958 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CASQ2O14958 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.21■■□□□ 1.31
CASQ2O14958 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.21■■□□□ 1.31
CASQ2O14958 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
CASQ2O14958 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
CASQ2O14958 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.2■■□□□ 1.3
CASQ2O14958 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CASQ2O14958 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.2■■□□□ 1.3
CASQ2O14958 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CASQ2O14958 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CASQ2O14958 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CASQ2O14958 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CASQ2O14958 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CASQ2O14958 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CASQ2O14958 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CASQ2O14958 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.19■■□□□ 1.3
CASQ2O14958 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CASQ2O14958 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CASQ2O14958 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CASQ2O14958 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.19■■□□□ 1.3
CASQ2O14958 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CASQ2O14958 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.18■■□□□ 1.3
CASQ2O14958 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CASQ2O14958 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CASQ2O14958 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
CASQ2O14958 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CASQ2O14958 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.17■■□□□ 1.3
CASQ2O14958 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CASQ2O14958 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
CASQ2O14958 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CASQ2O14958 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CASQ2O14958 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CASQ2O14958 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CASQ2O14958 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.16■■□□□ 1.3
CASQ2O14958 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CASQ2O14958 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CASQ2O14958 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CASQ2O14958 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CASQ2O14958 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CASQ2O14958 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CASQ2O14958 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
CASQ2O14958 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
CASQ2O14958 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CASQ2O14958 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.14■■□□□ 1.3
CASQ2O14958 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
CASQ2O14958 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CASQ2O14958 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CASQ2O14958 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.14■■□□□ 1.29
CASQ2O14958 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CASQ2O14958 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CASQ2O14958 AC138932.3-201ENST00000567634 1902 ntBASIC23.14■■□□□ 1.29
CASQ2O14958 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CASQ2O14958 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CASQ2O14958 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CASQ2O14958 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CASQ2O14958 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CASQ2O14958 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CASQ2O14958 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CASQ2O14958 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.13■■□□□ 1.29
CASQ2O14958 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CASQ2O14958 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CASQ2O14958 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.12■■□□□ 1.29
CASQ2O14958 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CASQ2O14958 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CASQ2O14958 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.12■■□□□ 1.29
CASQ2O14958 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CASQ2O14958 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CASQ2O14958 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CASQ2O14958 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CASQ2O14958 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CASQ2O14958 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CASQ2O14958 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
CASQ2O14958 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CASQ2O14958 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CASQ2O14958 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CASQ2O14958 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CASQ2O14958 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.1■■□□□ 1.29
CASQ2O14958 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CASQ2O14958 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.09■■□□□ 1.29
CASQ2O14958 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CASQ2O14958 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CASQ2O14958 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms