Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.34■■□□□ 1.49
CCDC189A1A4V9 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.34■■□□□ 1.49
CCDC189A1A4V9 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.34■■□□□ 1.49
CCDC189A1A4V9 LINC00543-201ENST00000567234 1845 ntBASIC24.33■■□□□ 1.49
CCDC189A1A4V9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
CCDC189A1A4V9 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
CCDC189A1A4V9 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CCDC189A1A4V9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.33■■□□□ 1.49
CCDC189A1A4V9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.33■■□□□ 1.49
CCDC189A1A4V9 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.33■■□□□ 1.48
CCDC189A1A4V9 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
CCDC189A1A4V9 AC142472.1-201ENST00000612013 1741 ntBASIC24.32■■□□□ 1.48
CCDC189A1A4V9 AC091060.1-201ENST00000623524 1766 ntBASIC24.32■■□□□ 1.48
CCDC189A1A4V9 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCDC189A1A4V9 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCDC189A1A4V9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCDC189A1A4V9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCDC189A1A4V9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CCDC189A1A4V9 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.32■■□□□ 1.48
CCDC189A1A4V9 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
CCDC189A1A4V9 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCDC189A1A4V9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CCDC189A1A4V9 AC008813.1-201ENST00000536597 885 ntBASIC24.31■■□□□ 1.48
CCDC189A1A4V9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
CCDC189A1A4V9 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCDC189A1A4V9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.31■■□□□ 1.48
CCDC189A1A4V9 AP004609.3-201ENST00000610705 1884 ntBASIC24.3■■□□□ 1.48
CCDC189A1A4V9 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CCDC189A1A4V9 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.3■■□□□ 1.48
CCDC189A1A4V9 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.3■■□□□ 1.48
CCDC189A1A4V9 RPS2P35-201ENST00000443417 897 ntBASIC24.3■■□□□ 1.48
CCDC189A1A4V9 DUX4L13-201ENST00000554103 1267 ntBASIC24.3■■□□□ 1.48
CCDC189A1A4V9 DUX4L15-201ENST00000611059 1267 ntBASIC24.3■■□□□ 1.48
CCDC189A1A4V9 DUX4L23-201ENST00000615195 1269 ntBASIC24.3■■□□□ 1.48
CCDC189A1A4V9 DUX4L24-201ENST00000617576 1269 ntBASIC24.3■■□□□ 1.48
CCDC189A1A4V9 DUX4L22-201ENST00000618238 1269 ntBASIC24.3■■□□□ 1.48
CCDC189A1A4V9 DUX4L20-201ENST00000619712 1269 ntBASIC24.3■■□□□ 1.48
CCDC189A1A4V9 DUX4L21-201ENST00000622058 1269 ntBASIC24.3■■□□□ 1.48
CCDC189A1A4V9 DUX4L10-201ENST00000622460 1267 ntBASIC24.3■■□□□ 1.48
CCDC189A1A4V9 DUX4L25-201ENST00000624915 1269 ntBASIC24.3■■□□□ 1.48
CCDC189A1A4V9 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CCDC189A1A4V9 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
CCDC189A1A4V9 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CCDC189A1A4V9 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CCDC189A1A4V9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CCDC189A1A4V9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CCDC189A1A4V9 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CCDC189A1A4V9 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CCDC189A1A4V9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC24.29■■□□□ 1.48
CCDC189A1A4V9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCDC189A1A4V9 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CCDC189A1A4V9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCDC189A1A4V9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCDC189A1A4V9 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCDC189A1A4V9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.28■■□□□ 1.48
CCDC189A1A4V9 AC133561.1-201ENST00000568600 2415 ntBASIC24.28■■□□□ 1.48
CCDC189A1A4V9 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.28■■□□□ 1.48
CCDC189A1A4V9 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCDC189A1A4V9 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.27■■□□□ 1.48
CCDC189A1A4V9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.27■■□□□ 1.48
CCDC189A1A4V9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCDC189A1A4V9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCDC189A1A4V9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.26■■□□□ 1.47
CCDC189A1A4V9 AC145676.1-201ENST00000514988 2004 ntBASIC24.26■■□□□ 1.47
CCDC189A1A4V9 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCDC189A1A4V9 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCDC189A1A4V9 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.25■■□□□ 1.47
CCDC189A1A4V9 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
CCDC189A1A4V9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.25■■□□□ 1.47
CCDC189A1A4V9 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
CCDC189A1A4V9 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCDC189A1A4V9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.24■■□□□ 1.47
CCDC189A1A4V9 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CCDC189A1A4V9 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.24■■□□□ 1.47
CCDC189A1A4V9 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CCDC189A1A4V9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CCDC189A1A4V9 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CCDC189A1A4V9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
CCDC189A1A4V9 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
CCDC189A1A4V9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.23■■□□□ 1.47
CCDC189A1A4V9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.23■■□□□ 1.47
CCDC189A1A4V9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
CCDC189A1A4V9 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
CCDC189A1A4V9 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCDC189A1A4V9 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CCDC189A1A4V9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCDC189A1A4V9 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCDC189A1A4V9 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCDC189A1A4V9 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCDC189A1A4V9 AC148477.6-201ENST00000623746 465 ntBASIC24.22■■□□□ 1.47
CCDC189A1A4V9 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CCDC189A1A4V9 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CCDC189A1A4V9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.2■■□□□ 1.47
CCDC189A1A4V9 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.2■■□□□ 1.47
CCDC189A1A4V9 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CCDC189A1A4V9 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
CCDC189A1A4V9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.2■■□□□ 1.46
CCDC189A1A4V9 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCDC189A1A4V9 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCDC189A1A4V9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.2■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms