Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC29.43■■■□□ 2.3
DDX49Q9Y6V7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
DDX49Q9Y6V7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
DDX49Q9Y6V7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
DDX49Q9Y6V7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
DDX49Q9Y6V7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
DDX49Q9Y6V7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
DDX49Q9Y6V7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC29.42■■■□□ 2.3
DDX49Q9Y6V7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
DDX49Q9Y6V7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
DDX49Q9Y6V7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
DDX49Q9Y6V7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC29.42■■■□□ 2.3
DDX49Q9Y6V7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
DDX49Q9Y6V7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
DDX49Q9Y6V7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
DDX49Q9Y6V7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
DDX49Q9Y6V7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
DDX49Q9Y6V7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC29.42■■■□□ 2.3
DDX49Q9Y6V7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
DDX49Q9Y6V7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC29.41■■■□□ 2.3
DDX49Q9Y6V7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC29.41■■■□□ 2.3
DDX49Q9Y6V7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
DDX49Q9Y6V7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC29.4■■■□□ 2.3
DDX49Q9Y6V7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC29.39■■■□□ 2.3
DDX49Q9Y6V7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
DDX49Q9Y6V7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
DDX49Q9Y6V7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC29.39■■■□□ 2.3
DDX49Q9Y6V7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
DDX49Q9Y6V7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
DDX49Q9Y6V7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
DDX49Q9Y6V7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC29.38■■■□□ 2.29
DDX49Q9Y6V7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
DDX49Q9Y6V7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
DDX49Q9Y6V7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC29.38■■■□□ 2.29
DDX49Q9Y6V7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
DDX49Q9Y6V7 AC091060.1-201ENST00000623524 1766 ntBASIC29.37■■■□□ 2.29
DDX49Q9Y6V7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
DDX49Q9Y6V7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
DDX49Q9Y6V7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
DDX49Q9Y6V7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
DDX49Q9Y6V7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
DDX49Q9Y6V7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC29.36■■■□□ 2.29
DDX49Q9Y6V7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC29.36■■■□□ 2.29
DDX49Q9Y6V7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
DDX49Q9Y6V7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
DDX49Q9Y6V7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC29.35■■■□□ 2.29
DDX49Q9Y6V7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC29.34■■■□□ 2.29
DDX49Q9Y6V7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC29.33■■■□□ 2.29
DDX49Q9Y6V7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
DDX49Q9Y6V7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
DDX49Q9Y6V7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC29.32■■■□□ 2.28
DDX49Q9Y6V7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
DDX49Q9Y6V7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
DDX49Q9Y6V7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC29.31■■■□□ 2.28
DDX49Q9Y6V7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
DDX49Q9Y6V7 GPX1-201ENST00000419349 1106 ntBASIC29.3■■■□□ 2.28
DDX49Q9Y6V7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
DDX49Q9Y6V7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC29.3■■■□□ 2.28
DDX49Q9Y6V7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
DDX49Q9Y6V7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
DDX49Q9Y6V7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
DDX49Q9Y6V7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
DDX49Q9Y6V7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC29.29■■■□□ 2.28
DDX49Q9Y6V7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
DDX49Q9Y6V7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC29.29■■■□□ 2.28
DDX49Q9Y6V7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC29.29■■■□□ 2.28
DDX49Q9Y6V7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
DDX49Q9Y6V7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
DDX49Q9Y6V7 AC100797.4-201ENST00000631653 1827 ntBASIC29.29■■■□□ 2.28
DDX49Q9Y6V7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
DDX49Q9Y6V7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC29.28■■■□□ 2.28
DDX49Q9Y6V7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC29.28■■■□□ 2.28
DDX49Q9Y6V7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
DDX49Q9Y6V7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
DDX49Q9Y6V7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC29.26■■■□□ 2.27
DDX49Q9Y6V7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
DDX49Q9Y6V7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC29.25■■■□□ 2.27
DDX49Q9Y6V7 RARRES2P2-201ENST00000394842 485 ntBASIC29.25■■■□□ 2.27
DDX49Q9Y6V7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
DDX49Q9Y6V7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
DDX49Q9Y6V7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC29.24■■■□□ 2.27
DDX49Q9Y6V7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC29.24■■■□□ 2.27
DDX49Q9Y6V7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC29.24■■■□□ 2.27
DDX49Q9Y6V7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC29.23■■■□□ 2.27
DDX49Q9Y6V7 AC110285.7-201ENST00000624417 1536 ntBASIC29.23■■■□□ 2.27
DDX49Q9Y6V7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC29.22■■■□□ 2.27
DDX49Q9Y6V7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC29.22■■■□□ 2.27
DDX49Q9Y6V7 AC020928.2-201ENST00000588717 2197 ntBASIC29.22■■■□□ 2.27
DDX49Q9Y6V7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC29.21■■■□□ 2.27
DDX49Q9Y6V7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC29.21■■■□□ 2.27
DDX49Q9Y6V7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
DDX49Q9Y6V7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
DDX49Q9Y6V7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC29.2■■■□□ 2.27
DDX49Q9Y6V7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.26
DDX49Q9Y6V7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
DDX49Q9Y6V7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
DDX49Q9Y6V7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
DDX49Q9Y6V7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC29.18■■■□□ 2.26
DDX49Q9Y6V7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
DDX49Q9Y6V7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC29.18■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms