Protein–RNA interactions for Protein: Q9HAP6

LIN7B, Protein lin-7 homolog B, humanhuman

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7BQ9HAP6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LIN7BQ9HAP6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LIN7BQ9HAP6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
LIN7BQ9HAP6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
LIN7BQ9HAP6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LIN7BQ9HAP6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
LIN7BQ9HAP6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LIN7BQ9HAP6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.49■■□□□ 1.03
LIN7BQ9HAP6 MIR3665-201ENST00000578708 105 ntBASIC21.49■■□□□ 1.03
LIN7BQ9HAP6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LIN7BQ9HAP6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
LIN7BQ9HAP6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.48■■□□□ 1.03
LIN7BQ9HAP6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.48■■□□□ 1.03
LIN7BQ9HAP6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LIN7BQ9HAP6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LIN7BQ9HAP6 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LIN7BQ9HAP6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.47■■□□□ 1.03
LIN7BQ9HAP6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LIN7BQ9HAP6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.47■■□□□ 1.03
LIN7BQ9HAP6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LIN7BQ9HAP6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.46■■□□□ 1.03
LIN7BQ9HAP6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LIN7BQ9HAP6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LIN7BQ9HAP6 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.45■■□□□ 1.02
LIN7BQ9HAP6 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
LIN7BQ9HAP6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.45■■□□□ 1.02
LIN7BQ9HAP6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LIN7BQ9HAP6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LIN7BQ9HAP6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LIN7BQ9HAP6 AL162393.1-201ENST00000437852 946 ntBASIC21.45■■□□□ 1.02
LIN7BQ9HAP6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LIN7BQ9HAP6 AC005559.1-201ENST00000589661 871 ntBASIC21.45■■□□□ 1.02
LIN7BQ9HAP6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
LIN7BQ9HAP6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LIN7BQ9HAP6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.45■■□□□ 1.02
LIN7BQ9HAP6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
LIN7BQ9HAP6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
LIN7BQ9HAP6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LIN7BQ9HAP6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LIN7BQ9HAP6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.44■■□□□ 1.02
LIN7BQ9HAP6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.44■■□□□ 1.02
LIN7BQ9HAP6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LIN7BQ9HAP6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LIN7BQ9HAP6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.44■■□□□ 1.02
LIN7BQ9HAP6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
LIN7BQ9HAP6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.43■■□□□ 1.02
LIN7BQ9HAP6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LIN7BQ9HAP6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.43■■□□□ 1.02
LIN7BQ9HAP6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.43■■□□□ 1.02
LIN7BQ9HAP6 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.43■■□□□ 1.02
LIN7BQ9HAP6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LIN7BQ9HAP6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LIN7BQ9HAP6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LIN7BQ9HAP6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LIN7BQ9HAP6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
LIN7BQ9HAP6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LIN7BQ9HAP6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
LIN7BQ9HAP6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LIN7BQ9HAP6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LIN7BQ9HAP6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
LIN7BQ9HAP6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LIN7BQ9HAP6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.41■■□□□ 1.02
LIN7BQ9HAP6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LIN7BQ9HAP6 RPS2P35-201ENST00000443417 897 ntBASIC21.41■■□□□ 1.02
LIN7BQ9HAP6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LIN7BQ9HAP6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
LIN7BQ9HAP6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
LIN7BQ9HAP6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LIN7BQ9HAP6 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
LIN7BQ9HAP6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LIN7BQ9HAP6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LIN7BQ9HAP6 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
LIN7BQ9HAP6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LIN7BQ9HAP6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LIN7BQ9HAP6 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
LIN7BQ9HAP6 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LIN7BQ9HAP6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
LIN7BQ9HAP6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.4■■□□□ 1.02
LIN7BQ9HAP6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LIN7BQ9HAP6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.39■■□□□ 1.01
LIN7BQ9HAP6 DUX4L28-201ENST00000623687 678 ntBASIC21.39■■□□□ 1.01
LIN7BQ9HAP6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
LIN7BQ9HAP6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
LIN7BQ9HAP6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LIN7BQ9HAP6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.37■■□□□ 1.01
LIN7BQ9HAP6 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LIN7BQ9HAP6 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.37■■□□□ 1.01
LIN7BQ9HAP6 LINC00273-201ENST00000539813 1452 ntBASIC21.37■■□□□ 1.01
LIN7BQ9HAP6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.37■■□□□ 1.01
LIN7BQ9HAP6 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LIN7BQ9HAP6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LIN7BQ9HAP6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LIN7BQ9HAP6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.35■■□□□ 1.01
LIN7BQ9HAP6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
LIN7BQ9HAP6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LIN7BQ9HAP6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
LIN7BQ9HAP6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LIN7BQ9HAP6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.34■■□□□ 1.01
LIN7BQ9HAP6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.34■■□□□ 1.01
LIN7BQ9HAP6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms