Protein–RNA interactions for Protein: Q9H8X3

LINC00574, Putative uncharacterized protein LINC00574, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00574Q9H8X3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00574Q9H8X3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
LINC00574Q9H8X3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.35■□□□□ 0.85
LINC00574Q9H8X3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
LINC00574Q9H8X3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
LINC00574Q9H8X3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00574Q9H8X3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00574Q9H8X3 AP004609.3-201ENST00000610705 1884 ntBASIC20.35■□□□□ 0.85
LINC00574Q9H8X3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00574Q9H8X3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.34■□□□□ 0.85
LINC00574Q9H8X3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00574Q9H8X3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.34■□□□□ 0.85
LINC00574Q9H8X3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00574Q9H8X3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LINC00574Q9H8X3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LINC00574Q9H8X3 MIR639-201ENST00000384974 98 ntBASIC20.33■□□□□ 0.85
LINC00574Q9H8X3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.33■□□□□ 0.85
LINC00574Q9H8X3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LINC00574Q9H8X3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.32■□□□□ 0.84
LINC00574Q9H8X3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LINC00574Q9H8X3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LINC00574Q9H8X3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LINC00574Q9H8X3 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00574Q9H8X3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00574Q9H8X3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00574Q9H8X3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00574Q9H8X3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.31■□□□□ 0.84
LINC00574Q9H8X3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LINC00574Q9H8X3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINC00574Q9H8X3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.3■□□□□ 0.84
LINC00574Q9H8X3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LINC00574Q9H8X3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINC00574Q9H8X3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LINC00574Q9H8X3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.29■□□□□ 0.84
LINC00574Q9H8X3 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.29■□□□□ 0.84
LINC00574Q9H8X3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LINC00574Q9H8X3 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.29■□□□□ 0.84
LINC00574Q9H8X3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.29■□□□□ 0.84
LINC00574Q9H8X3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.29■□□□□ 0.84
LINC00574Q9H8X3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
LINC00574Q9H8X3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.29■□□□□ 0.84
LINC00574Q9H8X3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LINC00574Q9H8X3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LINC00574Q9H8X3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.28■□□□□ 0.84
LINC00574Q9H8X3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC00574Q9H8X3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.28■□□□□ 0.84
LINC00574Q9H8X3 AL359258.2-201ENST00000564063 1566 ntBASIC20.28■□□□□ 0.84
LINC00574Q9H8X3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LINC00574Q9H8X3 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.28■□□□□ 0.84
LINC00574Q9H8X3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.27■□□□□ 0.84
LINC00574Q9H8X3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.27■□□□□ 0.84
LINC00574Q9H8X3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LINC00574Q9H8X3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LINC00574Q9H8X3 AC126177.7-201ENST00000547904 679 ntBASIC20.27■□□□□ 0.84
LINC00574Q9H8X3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.26■□□□□ 0.83
LINC00574Q9H8X3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00574Q9H8X3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00574Q9H8X3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.26■□□□□ 0.83
LINC00574Q9H8X3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00574Q9H8X3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
LINC00574Q9H8X3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.25■□□□□ 0.83
LINC00574Q9H8X3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LINC00574Q9H8X3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
LINC00574Q9H8X3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.24■□□□□ 0.83
LINC00574Q9H8X3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00574Q9H8X3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00574Q9H8X3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.24■□□□□ 0.83
LINC00574Q9H8X3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00574Q9H8X3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00574Q9H8X3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINC00574Q9H8X3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINC00574Q9H8X3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.23■□□□□ 0.83
LINC00574Q9H8X3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.23■□□□□ 0.83
LINC00574Q9H8X3 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00574Q9H8X3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00574Q9H8X3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00574Q9H8X3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00574Q9H8X3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00574Q9H8X3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.22■□□□□ 0.83
LINC00574Q9H8X3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.22■□□□□ 0.83
LINC00574Q9H8X3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00574Q9H8X3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00574Q9H8X3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00574Q9H8X3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00574Q9H8X3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00574Q9H8X3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00574Q9H8X3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00574Q9H8X3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
LINC00574Q9H8X3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00574Q9H8X3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00574Q9H8X3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.22■□□□□ 0.83
LINC00574Q9H8X3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINC00574Q9H8X3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LINC00574Q9H8X3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.21■□□□□ 0.83
LINC00574Q9H8X3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.21■□□□□ 0.83
LINC00574Q9H8X3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.21■□□□□ 0.83
LINC00574Q9H8X3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
LINC00574Q9H8X3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
LINC00574Q9H8X3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LINC00574Q9H8X3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms