Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC31.22■■■□□ 2.59
USP44Q9H0E7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC31.22■■■□□ 2.59
USP44Q9H0E7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC31.22■■■□□ 2.59
USP44Q9H0E7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
USP44Q9H0E7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
USP44Q9H0E7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC31.21■■■□□ 2.59
USP44Q9H0E7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
USP44Q9H0E7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
USP44Q9H0E7 AL449106.1-201ENST00000608517 1980 ntBASIC31.21■■■□□ 2.59
USP44Q9H0E7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
USP44Q9H0E7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
USP44Q9H0E7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
USP44Q9H0E7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
USP44Q9H0E7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.58
USP44Q9H0E7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
USP44Q9H0E7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
USP44Q9H0E7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
USP44Q9H0E7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
USP44Q9H0E7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.19■■■□□ 2.58
USP44Q9H0E7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC31.19■■■□□ 2.58
USP44Q9H0E7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
USP44Q9H0E7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC31.18■■■□□ 2.58
USP44Q9H0E7 RARRES2P2-201ENST00000394842 485 ntBASIC31.17■■■□□ 2.58
USP44Q9H0E7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
USP44Q9H0E7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
USP44Q9H0E7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
USP44Q9H0E7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC31.16■■■□□ 2.58
USP44Q9H0E7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
USP44Q9H0E7 ECEL1P2-201ENST00000461596 1295 ntBASIC31.15■■■□□ 2.58
USP44Q9H0E7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
USP44Q9H0E7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
USP44Q9H0E7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
USP44Q9H0E7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
USP44Q9H0E7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
USP44Q9H0E7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC31.13■■■□□ 2.57
USP44Q9H0E7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC31.13■■■□□ 2.57
USP44Q9H0E7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC31.12■■■□□ 2.57
USP44Q9H0E7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
USP44Q9H0E7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC31.12■■■□□ 2.57
USP44Q9H0E7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
USP44Q9H0E7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
USP44Q9H0E7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
USP44Q9H0E7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
USP44Q9H0E7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
USP44Q9H0E7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
USP44Q9H0E7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC31.08■■■□□ 2.57
USP44Q9H0E7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
USP44Q9H0E7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
USP44Q9H0E7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC31.07■■■□□ 2.57
USP44Q9H0E7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC31.07■■■□□ 2.56
USP44Q9H0E7 AL359504.2-201ENST00000605506 1601 ntBASIC31.07■■■□□ 2.56
USP44Q9H0E7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
USP44Q9H0E7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC31.07■■■□□ 2.56
USP44Q9H0E7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
USP44Q9H0E7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
USP44Q9H0E7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC31.06■■■□□ 2.56
USP44Q9H0E7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.06■■■□□ 2.56
USP44Q9H0E7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
USP44Q9H0E7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
USP44Q9H0E7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC31.05■■■□□ 2.56
USP44Q9H0E7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
USP44Q9H0E7 AC025884.2-201ENST00000553429 711 ntBASIC31.05■■■□□ 2.56
USP44Q9H0E7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC31.05■■■□□ 2.56
USP44Q9H0E7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
USP44Q9H0E7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
USP44Q9H0E7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC31.04■■■□□ 2.56
USP44Q9H0E7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC31.04■■■□□ 2.56
USP44Q9H0E7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
USP44Q9H0E7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
USP44Q9H0E7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC31.04■■■□□ 2.56
USP44Q9H0E7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC31.03■■■□□ 2.56
USP44Q9H0E7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.03■■■□□ 2.56
USP44Q9H0E7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC31.03■■■□□ 2.56
USP44Q9H0E7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
USP44Q9H0E7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
USP44Q9H0E7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
USP44Q9H0E7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
USP44Q9H0E7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
USP44Q9H0E7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
USP44Q9H0E7 SMPD5-203ENST00000639008 1464 ntBASIC31.01■■■□□ 2.55
USP44Q9H0E7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
USP44Q9H0E7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC31■■■□□ 2.55
USP44Q9H0E7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC31■■■□□ 2.55
USP44Q9H0E7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
USP44Q9H0E7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
USP44Q9H0E7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC30.99■■■□□ 2.55
USP44Q9H0E7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC30.98■■■□□ 2.55
USP44Q9H0E7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC30.98■■■□□ 2.55
USP44Q9H0E7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC30.98■■■□□ 2.55
USP44Q9H0E7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC30.98■■■□□ 2.55
USP44Q9H0E7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
USP44Q9H0E7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
USP44Q9H0E7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
USP44Q9H0E7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC30.96■■■□□ 2.55
USP44Q9H0E7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC30.96■■■□□ 2.55
USP44Q9H0E7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
USP44Q9H0E7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
USP44Q9H0E7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.54
USP44Q9H0E7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
USP44Q9H0E7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC30.94■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms