Protein–RNA interactions for Protein: Q9BZJ0

CRNKL1, Crooked neck-like protein 1, humanhuman

Known RBP Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1Q9BZJ0 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
CRNKL1Q9BZJ0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
CRNKL1Q9BZJ0 AC025884.2-201ENST00000553429 711 ntBASIC29.64■■■□□ 2.34
CRNKL1Q9BZJ0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC29.64■■■□□ 2.33
CRNKL1Q9BZJ0 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
CRNKL1Q9BZJ0 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
CRNKL1Q9BZJ0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC29.62■■■□□ 2.33
CRNKL1Q9BZJ0 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC29.62■■■□□ 2.33
CRNKL1Q9BZJ0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC29.62■■■□□ 2.33
CRNKL1Q9BZJ0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
CRNKL1Q9BZJ0 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
CRNKL1Q9BZJ0 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CRNKL1Q9BZJ0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC29.61■■■□□ 2.33
CRNKL1Q9BZJ0 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CRNKL1Q9BZJ0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC29.6■■■□□ 2.33
CRNKL1Q9BZJ0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC29.6■■■□□ 2.33
CRNKL1Q9BZJ0 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC29.6■■■□□ 2.33
CRNKL1Q9BZJ0 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CRNKL1Q9BZJ0 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CRNKL1Q9BZJ0 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC29.59■■■□□ 2.33
CRNKL1Q9BZJ0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
CRNKL1Q9BZJ0 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC29.59■■■□□ 2.33
CRNKL1Q9BZJ0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC29.58■■■□□ 2.33
CRNKL1Q9BZJ0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
CRNKL1Q9BZJ0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
CRNKL1Q9BZJ0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC29.58■■■□□ 2.33
CRNKL1Q9BZJ0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC29.57■■■□□ 2.32
CRNKL1Q9BZJ0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC29.57■■■□□ 2.32
CRNKL1Q9BZJ0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC29.57■■■□□ 2.32
CRNKL1Q9BZJ0 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC29.57■■■□□ 2.32
CRNKL1Q9BZJ0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
CRNKL1Q9BZJ0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC29.56■■■□□ 2.32
CRNKL1Q9BZJ0 AC142086.6-201ENST00000621154 1765 ntBASIC29.56■■■□□ 2.32
CRNKL1Q9BZJ0 SHF-206ENST00000560471 2499 ntTSL 5 BASIC29.55■■■□□ 2.32
CRNKL1Q9BZJ0 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CRNKL1Q9BZJ0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC29.55■■■□□ 2.32
CRNKL1Q9BZJ0 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
CRNKL1Q9BZJ0 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CRNKL1Q9BZJ0 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CRNKL1Q9BZJ0 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC29.55■■■□□ 2.32
CRNKL1Q9BZJ0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC29.55■■■□□ 2.32
CRNKL1Q9BZJ0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
CRNKL1Q9BZJ0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC29.54■■■□□ 2.32
CRNKL1Q9BZJ0 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CRNKL1Q9BZJ0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC29.54■■■□□ 2.32
CRNKL1Q9BZJ0 AL359504.2-201ENST00000605506 1601 ntBASIC29.54■■■□□ 2.32
CRNKL1Q9BZJ0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC29.54■■■□□ 2.32
CRNKL1Q9BZJ0 BX255925.1-201ENST00000566954 1854 ntBASIC29.54■■■□□ 2.32
CRNKL1Q9BZJ0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CRNKL1Q9BZJ0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
CRNKL1Q9BZJ0 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
CRNKL1Q9BZJ0 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC29.53■■■□□ 2.32
CRNKL1Q9BZJ0 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
CRNKL1Q9BZJ0 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CRNKL1Q9BZJ0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
CRNKL1Q9BZJ0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC29.52■■■□□ 2.32
CRNKL1Q9BZJ0 RP9P-202ENST00000450133 1212 ntBASIC29.52■■■□□ 2.32
CRNKL1Q9BZJ0 GFER-205ENST00000569451 517 ntTSL 5 BASIC29.52■■■□□ 2.32
CRNKL1Q9BZJ0 AC012354.3-201ENST00000623734 483 ntBASIC29.52■■■□□ 2.32
CRNKL1Q9BZJ0 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
CRNKL1Q9BZJ0 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.32
CRNKL1Q9BZJ0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC29.51■■■□□ 2.31
CRNKL1Q9BZJ0 AC009831.1-201ENST00000580420 1582 ntBASIC29.51■■■□□ 2.31
CRNKL1Q9BZJ0 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC29.5■■■□□ 2.31
CRNKL1Q9BZJ0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
CRNKL1Q9BZJ0 KRT18P60-201ENST00000312876 1297 ntBASIC29.5■■■□□ 2.31
CRNKL1Q9BZJ0 MIR3960-201ENST00000583311 91 ntBASIC29.5■■■□□ 2.31
CRNKL1Q9BZJ0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
CRNKL1Q9BZJ0 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC29.5■■■□□ 2.31
CRNKL1Q9BZJ0 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC29.5■■■□□ 2.31
CRNKL1Q9BZJ0 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
CRNKL1Q9BZJ0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
CRNKL1Q9BZJ0 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
CRNKL1Q9BZJ0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
CRNKL1Q9BZJ0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
CRNKL1Q9BZJ0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
CRNKL1Q9BZJ0 AC133552.2-201ENST00000619106 1032 ntBASIC29.49■■■□□ 2.31
CRNKL1Q9BZJ0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
CRNKL1Q9BZJ0 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC29.49■■■□□ 2.31
CRNKL1Q9BZJ0 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC29.48■■■□□ 2.31
CRNKL1Q9BZJ0 AL449106.1-201ENST00000608517 1980 ntBASIC29.48■■■□□ 2.31
CRNKL1Q9BZJ0 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
CRNKL1Q9BZJ0 AC093536.1-201ENST00000569153 554 ntBASIC29.48■■■□□ 2.31
CRNKL1Q9BZJ0 AC026202.3-201ENST00000600805 1127 ntBASIC29.48■■■□□ 2.31
CRNKL1Q9BZJ0 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC29.48■■■□□ 2.31
CRNKL1Q9BZJ0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
CRNKL1Q9BZJ0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
CRNKL1Q9BZJ0 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CRNKL1Q9BZJ0 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CRNKL1Q9BZJ0 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC29.46■■■□□ 2.31
CRNKL1Q9BZJ0 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CRNKL1Q9BZJ0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC29.45■■■□□ 2.31
CRNKL1Q9BZJ0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC29.45■■■□□ 2.31
CRNKL1Q9BZJ0 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC29.45■■■□□ 2.31
CRNKL1Q9BZJ0 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
CRNKL1Q9BZJ0 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
CRNKL1Q9BZJ0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
CRNKL1Q9BZJ0 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
CRNKL1Q9BZJ0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC29.44■■■□□ 2.3
CRNKL1Q9BZJ0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC29.44■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms