Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
RNF5Q99942 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RNF5Q99942 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF5Q99942 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RNF5Q99942 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF5Q99942 AP004609.3-201ENST00000610705 1884 ntBASIC19.82■□□□□ 0.76
RNF5Q99942 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF5Q99942 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF5Q99942 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF5Q99942 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RNF5Q99942 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF5Q99942 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RNF5Q99942 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF5Q99942 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.81■□□□□ 0.76
RNF5Q99942 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF5Q99942 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF5Q99942 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF5Q99942 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF5Q99942 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF5Q99942 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF5Q99942 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.8■□□□□ 0.76
RNF5Q99942 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF5Q99942 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF5Q99942 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF5Q99942 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF5Q99942 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF5Q99942 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF5Q99942 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF5Q99942 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF5Q99942 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF5Q99942 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF5Q99942 MIR639-201ENST00000384974 98 ntBASIC19.78■□□□□ 0.76
RNF5Q99942 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RNF5Q99942 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF5Q99942 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.77■□□□□ 0.76
RNF5Q99942 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
RNF5Q99942 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF5Q99942 AL359258.2-201ENST00000564063 1566 ntBASIC19.76■□□□□ 0.75
RNF5Q99942 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF5Q99942 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.76■□□□□ 0.75
RNF5Q99942 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RNF5Q99942 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF5Q99942 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF5Q99942 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF5Q99942 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF5Q99942 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.75■□□□□ 0.75
RNF5Q99942 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.75■□□□□ 0.75
RNF5Q99942 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF5Q99942 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF5Q99942 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF5Q99942 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF5Q99942 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF5Q99942 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF5Q99942 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF5Q99942 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
RNF5Q99942 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF5Q99942 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF5Q99942 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF5Q99942 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF5Q99942 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF5Q99942 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF5Q99942 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RNF5Q99942 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF5Q99942 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
RNF5Q99942 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF5Q99942 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF5Q99942 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF5Q99942 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF5Q99942 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF5Q99942 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF5Q99942 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF5Q99942 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF5Q99942 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF5Q99942 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF5Q99942 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF5Q99942 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF5Q99942 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF5Q99942 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF5Q99942 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF5Q99942 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF5Q99942 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.7■□□□□ 0.74
RNF5Q99942 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF5Q99942 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF5Q99942 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF5Q99942 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RNF5Q99942 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF5Q99942 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF5Q99942 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
RNF5Q99942 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF5Q99942 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF5Q99942 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF5Q99942 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF5Q99942 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF5Q99942 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF5Q99942 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF5Q99942 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF5Q99942 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF5Q99942 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF5Q99942 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF5Q99942 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms